Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

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The map label for this gene is ybdZ [C]

Identifier: 53719340

GI number: 53719340

Start: 2032551

End: 2032775

Strand: Reverse

Name: ybdZ [C]

Synonym: BPSL1726

Alternate gene names: 53719340

Gene position: 2032775-2032551 (Counterclockwise)

Preceding gene: 53719342

Following gene: 53719339

Centisome position: 49.89

GC content: 57.33

Gene sequence:

>225_bases
ATGGACGACGAATTGTACTTCGTAGTGCGAAATAATGAGGGCCAGTATTCGGTCTGGATGGACGGGCGAAGCCTTCCCGC
CGGTTGGGAAACGGTCGGCGAACCTGCGACGAAGCAACAGTGTCTGCAACGCATCGAGCAACTCTGGACGGACATGGTGC
CTGCCAGCGTCCGCGAGCATCTCAATCAACATTCGGGCCCGGGAATCGACTATGCCGTACGATGA

Upstream 100 bases:

>100_bases
ATCCGGCGCGTCTTTCCAGCCGATGGTCTTGCGCGATTTCACCTGCGCGCCGCCACGGCAAAAACCCGGCACATCACCTT
GCTTTCCCTGGGAACCAGCT

Downstream 100 bases:

>100_bases
AATTCTGCCTATTGAAACGCTGGTTCGACCCAAAGTATCGGACTTCCGCGAGCATTACCTCGAAAAAGAGCGCCCGGTGA
AAATCGCGAGGGCGCTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: MbtH Domain Protein; MbtH-Like Protein; MbtH-Like Protein-Related Protein

Number of amino acids: Translated: 74; Mature: 74

Protein sequence:

>74_residues
MDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREHLNQHSGPGIDYAVR

Sequences:

>Translated_74_residues
MDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREHLNQHSGPGIDYAVR
>Mature_74_residues
MDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREHLNQHSGPGIDYAVR

Specific function: Could Be Involved In Enterobactin Synthesis. [C]

COG id: COG3251

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8508; Mature: 8508

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREH
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
LNQHSGPGIDYAVR
HHHCCCCCCCEECC
>Mature Secondary Structure
MDDELYFVVRNNEGQYSVWMDGRSLPAGWETVGEPATKQQCLQRIEQLWTDMVPASVREH
CCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHH
LNQHSGPGIDYAVR
HHHCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA