| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719265
Identifier: 53719265
GI number: 53719265
Start: 1902196
End: 1903266
Strand: Reverse
Name: 53719265
Synonym: BPSL1637
Alternate gene names: NA
Gene position: 1903266-1902196 (Counterclockwise)
Preceding gene: 53719281
Following gene: 53719252
Centisome position: 46.71
GC content: 50.33
Gene sequence:
>1071_bases ATGGCCACCGAACTCGATCCTCCCGATTCATTCGATCCATTCGATTCGATCGACTCATACGATTTATTCGACTCTCTCGA CGAGCGACAAACGAATTTCACGTTATCGTGCGCGATGGACTGGGGCCAGAATATCAAGAATCCCACCACGGACATCCTGG GAAAATTAATTATCGGCTACCTCGGCAAATCAACGAAGACGAAAAACAATAGATTTTCCATTGTCTGGGGTCCCGCGGTC TATGTCGACCCTCTTTCCGGATATGCCGCCAACGTAACCGCGATCTTCAAAAACACCAGCAACGACAAGGACTATCGCCT GGCATTCAGCGGAACCAATCCGAACTCACAGTTTGCCGATATAGTCATTGAAGACAATGACGTCAAAAATCTGACCCCGT TCTCGAAATATGTCAGCGATTGCCCGCCGGATGCGCTCATAGCAAACGGGACAGCCAAGGCATTGGACGTCACCCTTCAA ACCCTCCCCTCAAATAGCTCGGCATCGCTCACCGATTTCCTGAAAAATTTACCCAAAGGATCCACCCTCACCGTGACGGG GCATAGTCTCGGCGGCGTTCTGGCATCCACCTTCGCGCTATATTTCTCGCAATCCTCGGGTTACCCATTCAAAAACGTTT TCTGCCACTCTTTTGCAGCCGCCACCGCCGGAAACGTCGCATTTGTCGCATATTCAGACGGCTCGTTGACAGGAAAAATG AAGCGACTTTGGCATCGGTATGACGTCATTCCATTCTCGTGGAATTTATCCACGATGAACAGAATCAAGTATATTTACGA ACCCAATCTTTTCCCAACGGAGGACTTCATTCGCAAGATAAGAAAAATCGTCTATTACTTCTCCAACAAGCATATCTATT ACGCCCAGCCCGGATCGCTGGATCACTCCCAGCAATTCGAATTGGAAGGGGCATATCATTCCGGATTCAAGGTGTTCACG GATGAAGCCGGCTGGCAACACACGTTCGGATATCTGGCGCCGCTTTCCTTGACAGCCAATGATCTGAACGAGGGCGAGCC GTGGCAGCCGAGCCTTGGCACCCTCGCTTGA
Upstream 100 bases:
>100_bases GCGATACCCATATATTTTATTCGGGCAAGCACACTCACGAAGAGCTTGCGAATATCTTGAATTGCATGCCCCCACCCCGC CGAATTCAAGGAACACCATC
Downstream 100 bases:
>100_bases CCCACGACAGCGGGCGTTGGCACGCAAGGCTCCGTACGAGCCTTGCGAAGTTGCGCGCCCCGAAACGAGGCCACGCGCGG GCCATGCGGGCGGTTGCGGA
Product: putative lipase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFVAYSDGSLTGKM KRLWHRYDVIPFSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT DEAGWQHTFGYLAPLSLTANDLNEGEPWQPSLGTLA
Sequences:
>Translated_356_residues MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAV YVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQ TLPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFVAYSDGSLTGKM KRLWHRYDVIPFSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFT DEAGWQHTFGYLAPLSLTANDLNEGEPWQPSLGTLA >Mature_355_residues ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGYLGKSTKTKNNRFSIVWGPAVY VDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFADIVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQT LPSNSSASLTDFLKNLPKGSTLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFVAYSDGSLTGKMK RLWHRYDVIPFSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSLDHSQQFELEGAYHSGFKVFTD EAGWQHTFGYLAPLSLTANDLNEGEPWQPSLGTLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39509; Mature: 39378
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD HCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFVAYSDGSLTGKM CEEEEECCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH KRLWHRYDVIPFSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL HHHHHHHCCEEEEECCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTANDLNEGEPWQPSLGTLA CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure ATELDPPDSFDPFDSIDSYDLFDSLDERQTNFTLSCAMDWGQNIKNPTTDILGKLIIGY CCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH LGKSTKTKNNRFSIVWGPAVYVDPLSGYAANVTAIFKNTSNDKDYRLAFSGTNPNSQFAD HCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEEEECCCCCCCEEEEEECCCCCCCEEE IVIEDNDVKNLTPFSKYVSDCPPDALIANGTAKALDVTLQTLPSNSSASLTDFLKNLPKG EEEECCCCCCCCHHHHHHHHCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHHHHHCCCC STLTVTGHSLGGVLASTFALYFSQSSGYPFKNVFCHSFAAATAGNVAFVAYSDGSLTGKM CEEEEECCCHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH KRLWHRYDVIPFSWNLSTMNRIKYIYEPNLFPTEDFIRKIRKIVYYFSNKHIYYAQPGSL HHHHHHHCCEEEEECCCHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCC DHSQQFELEGAYHSGFKVFTDEAGWQHTFGYLAPLSLTANDLNEGEPWQPSLGTLA CCCCEEEECCCCCCCEEEEECCCCCCCHHHEEEEEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA