| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53719032
Identifier: 53719032
GI number: 53719032
Start: 1622837
End: 1624030
Strand: Reverse
Name: 53719032
Synonym: BPSL1396
Alternate gene names: NA
Gene position: 1624030-1622837 (Counterclockwise)
Preceding gene: 53719033
Following gene: 53719031
Centisome position: 39.86
GC content: 73.53
Gene sequence:
>1194_bases ATGACCATCAAGACATTGCGGCAAGAACCCGCGCTGGCGGGCGCGGCATCGCCCGCCGATACGCCCGCTTTCACGAGCGG CACGCTGGCCGCGCTCGTCGCGTTCGCGGCGATCACGCCGCTGCTGCTGCTCGTCGCGCCGGCCGTGGCCGGCCAGCTGG GCGCGCAGCTCGGGCTGTCGGCGTCGCGGATCGGCACGTACTTCTTCGTGGAGCTGGGCGCGTTCAGCGCCGCGACGCTG CCGTCGTACCTGTGGCTCGGCCGCATCGACGCGCGGCGCATCGCGTGGGGCGCGACCGCCGTGTTCTGCGCGGGCAATCT CGCGACCGCCGTATGGATGCCGGGCTTCGCGCCGCTACTCGCGCTGCGCGCGGCAACGGCGCTCGGCGGCGGCACGTTGA TGGTGCTCTGCATGACGAGCGCCGCGGCGAGCGGCAACAGCGATCGCGTCTACGGGCTCTGGGTCGTCGGCCAGTTGATC GCGGGCGCGGCCGGTCTGTTCCTGCTGCCGCATCTGTTCGATATGGTCGGACTGCGCGCGCTGTACGCCGTGCTCGCCGC GCTCGCGCTGTGCGCCGCGCCGCTCGCGCGCCGCTTTCCGGCCGTGCCGCGCGTGCGGGCGCAGCACGCGCCGCGCGCGC GGGCGCAAGCGGCGCGCATGGCGGCGGCGCTTGCGATCGGCGGCGTGCTGACGTTCTACGTCGCGATCGGCGGCGTGTGG ACCTTCGCGAGCAAAGCGGCGTCCGCCGTCGGCCTCGACGCGCAGACGAGCGGCAACGTGCTCGCGATCGCGAGCCTGAT GGGCATCGCGGGCGCGGCGCTCGCGTCATATCTGGGCGGTCGTGCGGCGCGGCGCGCGATGCTGCTCGCCGGATACGGCA TCCTCGCGGCGTCGCTCGTCGCGCTTGCCGCCGCGCCAAACGCGAACGGCTACACGCTCGCGATCTTCGGTTTCAAGTTC GCATGGACGTTCGTCCTGCCGTTCATGCTCGCGAGCGTCGCGGCCGTCGACGCGACGGGGCGCCTGATCGCGACGCTCAA TCTCGTGATCGGTTCGGGGCTCGCCGCCGGGCCGCTCGCCGCCGGACTGATGCTCGACGGCGGCGGCACGCTGCGCGCGC TGTTCTCGATCGCGGCCGCGGTCTCGCTCGTCTCGCTCGCGGCCATGCTGCGGGTCGAGCGCGACGCGCGCTGA
Upstream 100 bases:
>100_bases TCTACGAGTATGACCCGACGCCGCTCGCCGGCGCATCGCAGTTCGGCGCGATGCTCGGCATGTATCACGTTTTCTGAATC GAGCCCGCGAGATCACGACC
Downstream 100 bases:
>100_bases CGCCTCGACACTCCGTGTCGTTGCTTTCCCTTCCCTCTTCGCTTCGGCCCATCGCCATGACAAAAACCGCTTTCTTCACC GACGAACGCACTTTCTGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Transporter; MFS-Type Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MTIKTLRQEPALAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASRIGTYFFVELGAFSAATL PSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLI AGAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAARMAAALAIGGVLTFYVAIGGVW TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKF AWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR
Sequences:
>Translated_397_residues MTIKTLRQEPALAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASRIGTYFFVELGAFSAATL PSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLI AGAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAARMAAALAIGGVLTFYVAIGGVW TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKF AWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR >Mature_396_residues TIKTLRQEPALAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLSASRIGTYFFVELGAFSAATLP SYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLLALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIA GAAGLFLLPHLFDMVGLRALYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAARMAAALAIGGVLTFYVAIGGVWT FASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLVALAAAPNANGYTLAIFGFKFA WTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLAAGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39970; Mature: 39838
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKTLRQEPALAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLS CCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASRIGTYFFVELGAFSAATLPSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLL HHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHCCCHHHHH ALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIAGAAGLFLLPHLFDMVGLRA HHHHHHHCCCCCEEEHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAARMAAALAIGGVLTFYVAIGGVW HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ALAAAPNANGYTLAIFGFKFAWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLA HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH AGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR HCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIKTLRQEPALAGAASPADTPAFTSGTLAALVAFAAITPLLLLVAPAVAGQLGAQLGLS CCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC ASRIGTYFFVELGAFSAATLPSYLWLGRIDARRIAWGATAVFCAGNLATAVWMPGFAPLL HHHHHHEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCHHHHHCCCHHHHHHCCCHHHHH ALRAATALGGGTLMVLCMTSAAASGNSDRVYGLWVVGQLIAGAAGLFLLPHLFDMVGLRA HHHHHHHCCCCCEEEHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYAVLAALALCAAPLARRFPAVPRVRAQHAPRARAQAARMAAALAIGGVLTFYVAIGGVW HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TFASKAASAVGLDAQTSGNVLAIASLMGIAGAALASYLGGRAARRAMLLAGYGILAASLV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH ALAAAPNANGYTLAIFGFKFAWTFVLPFMLASVAAVDATGRLIATLNLVIGSGLAAGPLA HHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHH AGLMLDGGGTLRALFSIAAAVSLVSLAAMLRVERDAR HCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA