Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53719026

Identifier: 53719026

GI number: 53719026

Start: 1616714

End: 1617217

Strand: Reverse

Name: 53719026

Synonym: BPSL1388

Alternate gene names: NA

Gene position: 1617217-1616714 (Counterclockwise)

Preceding gene: 53719027

Following gene: 53719025

Centisome position: 39.69

GC content: 68.06

Gene sequence:

>504_bases
ATGACGCAGCCGAGCATCAACGCGCATTTCGAGATGCGCCGTCAGCAGATCACGTTGCCCACGCGGCTCTTCGCGGTGGT
CGACGCGCTGCTCTTCGCCGAAGCGTCCGACGCCCCGCCGCTGCGTCGCTCAAACTATTCGATCGCGCTGTTCGACCGCA
CGCCGGACGCGTCGCTCGCCGATCACGGCCCGTGGCTGATCGACTACGCGATCGCGCCGGGGCCAATTCGGCGCGTGCTC
GCCGAGCTCGCGGCCGGGCCGGTCGGTATGTCGTGGCTGATCAGCGCGTATTCGTTTGAGCGGCTGGCCGCCGAGTTGCG
CGAGCACCTCGACGTGCGGTTGCCGGACGGCCGCACCGCGCTGTTCCGGTTCTACGACGCGCGCATCATGCCCGACATCG
CGCGCGTGATGAGCGACGCGCAGCGCTCGCAATTCTTCGTCGCGACGTACGACTGGCTCGTCGAGATCGACGGGCGGCTG
ACCGGAGTGCATCCGCATGCTTGA

Upstream 100 bases:

>100_bases
CAGCCGCGGCGGCGGCCGTCGCCCCTTCCCCCACGCTCTGCCTCGAATGCCTGAAGGCGGCGGCCAAGAACGCCGCGACG
ATGGTCGCACGCGGATGACC

Downstream 100 bases:

>100_bases
ACTGAGCGCAGAACAGGTGGCCGGACTGGCGCAGATCGACGAGCGCGGCTTCGTCGAGCGCGTTCGGCAGGATCTCGTGA
AGGAGAATCCGGCGTTTGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTQPSINAHFEMRRQQITLPTRLFAVVDALLFAEASDAPPLRRSNYSIALFDRTPDASLADHGPWLIDYAIAPGPIRRVL
AELAAGPVGMSWLISAYSFERLAAELREHLDVRLPDGRTALFRFYDARIMPDIARVMSDAQRSQFFVATYDWLVEIDGRL
TGVHPHA

Sequences:

>Translated_167_residues
MTQPSINAHFEMRRQQITLPTRLFAVVDALLFAEASDAPPLRRSNYSIALFDRTPDASLADHGPWLIDYAIAPGPIRRVL
AELAAGPVGMSWLISAYSFERLAAELREHLDVRLPDGRTALFRFYDARIMPDIARVMSDAQRSQFFVATYDWLVEIDGRL
TGVHPHA
>Mature_166_residues
TQPSINAHFEMRRQQITLPTRLFAVVDALLFAEASDAPPLRRSNYSIALFDRTPDASLADHGPWLIDYAIAPGPIRRVLA
ELAAGPVGMSWLISAYSFERLAAELREHLDVRLPDGRTALFRFYDARIMPDIARVMSDAQRSQFFVATYDWLVEIDGRLT
GVHPHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18822; Mature: 18691

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPSINAHFEMRRQQITLPTRLFAVVDALLFAEASDAPPLRRSNYSIALFDRTPDASLA
CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
DHGPWLIDYAIAPGPIRRVLAELAAGPVGMSWLISAYSFERLAAELREHLDVRLPDGRTA
CCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCH
LFRFYDARIMPDIARVMSDAQRSQFFVATYDWLVEIDGRLTGVHPHA
HHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCEEECCCCCC
>Mature Secondary Structure 
TQPSINAHFEMRRQQITLPTRLFAVVDALLFAEASDAPPLRRSNYSIALFDRTPDASLA
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCC
DHGPWLIDYAIAPGPIRRVLAELAAGPVGMSWLISAYSFERLAAELREHLDVRLPDGRTA
CCCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCCH
LFRFYDARIMPDIARVMSDAQRSQFFVATYDWLVEIDGRLTGVHPHA
HHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEEEEECCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA