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The map label for this gene is potC [C]

Identifier: 53718937

GI number: 53718937

Start: 1515088

End: 1516002

Strand: Reverse

Name: potC [C]

Synonym: BPSL1301

Alternate gene names: 53718937

Gene position: 1516002-1515088 (Counterclockwise)

Preceding gene: 53718938

Following gene: 53718936

Centisome position: 37.21

GC content: 72.9

Gene sequence:

>915_bases
ATGACGCCTCCCCCGAAGGACGCCGCCGCCCTCGCCCGCCCCGCCGCCGCGGCCGGCCCGCACGCGCCCCCCGCCGTCCG
CCGCGCACGCCGCGCGCCGCTCGACTGGCTCGCCGCCGCGCAATGGGCGGTCACGCTCGCGCTGTGCGCGTTCCTGATCG
TACCCGTCGCGATGTCGGTGCTCGCCGGGCTCACGGTCAATTATTTTCGCGGGCCGTCGAGCGGGCTCACGCTGCGCTGG
CTCGGCGAGGTGTGGGCGCAATATCACGGCTCGGTATTCCTGTCGCTCGAAGTCGCGCTCGCGACGCTCGCCGTCACGCT
CGTCGCGGGCGTGCCCGCCGGCTACGCGCTCGCGCGCAGCCGCAGCCGCGTCTCGCGCCTGATCGAGGAGGCGCTCGTGC
TGCCCGTCGCGCTGCCGGGCCTCGCGTCCGCGCTCGCACTGCTGAGCGTCTACGGCGGCTTCGCCGCGTTCCGCACGAGC
CTGTGGTTCATCGTCGTCGGCCACGTCGTGTTCACGCTGCCGTTCATGGTCCGCGCGGTCGCGGCCGTCGCCGCGCGCGC
CGATCTGCGCACGCTCGAGGAAGGCGCGGCGAGCCTCGGCGCATCGTTCGCCACACGCTTCGCGACGATCGTGCTGCCGA
ACCTGCGCCCGGGCATCGTCGCCGGCGCGCTCGCGGTGCTCACGCTGTCGATCGGCGAATTCAACCTCACGTGGATGCTC
CACACGCCCGACACGAAGACGCTGCCTGTCGGCCTCGCCGATACGTACGCGTCACTGCGCCTCGAAATCGGCAGCGCGTA
CACGATCCTGTTCCTGCTGATGACGCTGCCGCTGCTCGTCGCGATGCAACGGCTCGGCGTCGAGCCGCCGGGCGCGCGCG
ATCGCACACGCGATCGCACGTGCAAGCGCCGCTGA

Upstream 100 bases:

>100_bases
CGCGCTCCCCGTCGCCGCGCGCGGTGCCGTCATCAGTTCTTCATCGACGCCGCCGATAATCCTCGTCGACGAAAACGTTT
ACATCGCATTGCGCACGCCC

Downstream 100 bases:

>100_bases
TGAGCCGGCGCCGCCGCGCCGCCTTCGCGATGCCTGTGCGCGCGGCGCTTTCGTTGCGCCCTCGCCGCGCTTTCGTTGCG
CCGCCGTTGTTTTCGGCCTT

Product: putative ABC transporter membrane protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC-Type Transporter Permease Component; Spermidine/Putrescine ABC Transporter Permease; ABC Transporter Membrane Component; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; ABC TRANSPORTER Membrane Component; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Molybdenum ABC Transporter Permease; Permease Protein

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTPPPKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRW
LGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTS
LWFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWML
HTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR

Sequences:

>Translated_304_residues
MTPPPKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRW
LGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTS
LWFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWML
HTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR
>Mature_303_residues
TPPPKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSVLAGLTVNYFRGPSSGLTLRWL
GEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARSRSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSL
WFIVVGHVVFTLPFMVRAVAAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWMLH
TPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRTCKRR

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787368, Length=211, Percent_Identity=29.3838862559242, Blast_Score=61, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32210; Mature: 32079

Theoretical pI: Translated: 11.22; Mature: 11.22

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPPKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSV
CCCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHH
RSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
HTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRT
ECCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
CKRR
CCCC
>Mature Secondary Structure 
TPPPKDAAALARPAAAAGPHAPPAVRRARRAPLDWLAAAQWAVTLALCAFLIVPVAMSV
CCCCCCHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAGLTVNYFRGPSSGLTLRWLGEVWAQYHGSVFLSLEVALATLAVTLVAGVPAGYALARS
HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHH
RSRVSRLIEEALVLPVALPGLASALALLSVYGGFAAFRTSLWFIVVGHVVFTLPFMVRAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVAARADLRTLEEGAASLGASFATRFATIVLPNLRPGIVAGALAVLTLSIGEFNLTWML
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEE
HTPDTKTLPVGLADTYASLRLEIGSAYTILFLLMTLPLLVAMQRLGVEPPGARDRTRDRT
ECCCCCEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
CKRR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA