Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718897

Identifier: 53718897

GI number: 53718897

Start: 1456647

End: 1458101

Strand: Reverse

Name: 53718897

Synonym: BPSL1262

Alternate gene names: NA

Gene position: 1458101-1456647 (Counterclockwise)

Preceding gene: 53718898

Following gene: 53718887

Centisome position: 35.79

GC content: 69.42

Gene sequence:

>1455_bases
ATGCCTATCACCGCACAACTGCCGCGAACGGCGCTGCTCGACAAGCTCTGGGCCCGGATGAACGAGCGCGGCGATTTCCC
GCTGCTGTCGGACGCGCTGCGCGCGACGATGGCCGCGATGAAGAACGACGAGCTCGACTTCACCGCGCTCGTGCGCGTCG
TGCTGTCGGACTTCGCGCTGACGCAGAAAGTGCTGCGGCTCGCGAATTCGGCGATGTACATGGCGTTCGGCGGCAACATC
ACGACCGTCACGCGCGCGCTGATGGTGCTCGGCATGGACGCCGTCGGCCATCTCGTCGTCGGGCTCAAGCTCGTCGACCA
CTTTCATCACAGCGCGCCGCGCCGCATCGACGCGAAGCTCGAACTGAACCGCGCGCTGCTGTCGGGCTGCGTCGCGCGCA
AGCTGACCGAGCACGTCGATCTTCGCGCGGGCGAGCAAGCGGTGGTCTGCACGCTGATGCGGCAGGTCGGCAAGCTGCTC
GTCGTCTGCTATCTCGACGCGGAATGGGAAGAGATCCGCCGGCGCGCGGCCGAGCATGACGACGACGAGGCCGCGTGCCG
CGCGGTGCTCGGCGTCGGCTACGACGAGATCGGCCTCGAGGCGGCATCGCGCTGGCGGCTGCCGGAGCTGATCCGCGCCG
GCATGACGCGCTTCGACGCGAACGACGGCGCGCCGCACGAGGTCCAGTGGTTGCGCGCGGTGAGCCACTGCTCGACCGAC
GTCGCGACCGCGCTCACGTCGACGCACGCGCAGCAGCGCGACGCGCGGATCGCCGCGCTCGCGCACCGCTTTCACGGCGT
GCTCGGCACGGATGCCGACGAGCTCGCCGACATCGCCGCGTCGCTGTCGCGCGAGGAAACGAGCGACACGGTGATGCGCG
AGATCGTCGAGCTGCGTGCGAACGCGGACAAGATCGCACGCGGCGCGTCGACGCCGCAGGCGTGCCTCGAGGCCGGCCTT
GCCGACCTGCGCGCGCTGCCGTCCGAGCACGTTCTGGGCCCGGTGCTCGCGCTCGCGTCCGAGAGCGTGCTCGCGGGCCT
CGCGTTCACGCGCACGGTGATGTTCGTGCGGCACGACGACGGCGTGTTCGCCGCGCGGCTCGGCTTCGGGCCGAACGTCG
ACGCGGCGCTCGAACGGTTGCGCTTTCACGAAACGTTCGAGCCGGACGTATTTCATCTCGCGATCACGAACTCGGTCGGC
ATCTTCATCGAGCATGCGCGCGATCCGAAGATGACCAAGCGTCTGCCCGCATGGTATCTGGACGCGTTCGACGACGCGCG
CGCATTCGTGCTGCTGCCCGTGATCGCGGAGCGCAACGCCGTCGCGCTGCTGTACGGCGACTGGGCGCTCGGCCAGCCGG
CGCGCAAGATCACGCCACAGGAAATGGGCGTGCTCAACGAACTCGCGGCCGAGCTCGGGCGCTTCTTTTGCGGCGCGCAG
GGCGACGATCGGTAG

Upstream 100 bases:

>100_bases
CTGCCGTCCGACGAACTCGCGCAACGCTTCGAGGCACAGGAGCTCCATCTGCACGCCACCGCATGACGCACGCCGCCGGC
TTTCTCAATCACTGATCCGT

Downstream 100 bases:

>100_bases
CGTTCGATCGCGCGCGGCACGGCGCGATGGCTTGGCGATATGGCGACACGGGCGCGTAGCGCGACGCAACGGCAACGCCT
TTCGCCTTTCGCCTTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Serine/Threonine Protein Kinase; Protein KinaseGAF; GAF-Domain-Containing Protein

Number of amino acids: Translated: 484; Mature: 483

Protein sequence:

>484_residues
MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI
TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLL
VVCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGLEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD
VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGL
ADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVG
IFIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ
GDDR

Sequences:

>Translated_484_residues
MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI
TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLL
VVCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGLEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD
VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGL
ADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVG
IFIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ
GDDR
>Mature_483_residues
PITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNIT
TVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLV
VCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGLEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTDV
ATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGLA
DLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGI
FIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQG
DDR

Specific function: Unknown

COG id: COG1639

COG function: function code T; Predicted signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53095; Mature: 52963

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFAL
CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKL
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLVVCYLDAEWEEIRRRAAEHD
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCC
DDEAACRAVLGVGYDEIGLEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD
CHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCHH
VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NADKIARGASTPQACLEAGLADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDD
CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
GVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGIFIEHARDPKMTKRLPAWYL
CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCHHHH
DAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ
HHHCCCCEEEEEEEHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC
GDDR
CCCC
>Mature Secondary Structure 
PITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFAL
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKL
HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLVVCYLDAEWEEIRRRAAEHD
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCC
DDEAACRAVLGVGYDEIGLEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD
CHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCHH
VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NADKIARGASTPQACLEAGLADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDD
CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC
GVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGIFIEHARDPKMTKRLPAWYL
CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCHHHH
DAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ
HHHCCCCEEEEEEEHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC
GDDR
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA