| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718829
Identifier: 53718829
GI number: 53718829
Start: 1377002
End: 1377757
Strand: Reverse
Name: 53718829
Synonym: BPSL1193
Alternate gene names: NA
Gene position: 1377757-1377002 (Counterclockwise)
Preceding gene: 53718830
Following gene: 53718828
Centisome position: 33.81
GC content: 71.03
Gene sequence:
>756_bases GTGAGTCAAAAACGGGGATTGGCTGTCTTTTTCGGTTGCGTGATCGCGCTCGTCGTCGCGTACGCCGCCACCTACCCGCG CTTTCACCCACAACCGGCCGCCGTAGCCGCGGCGAGCGCGCCCGTGATCGCGTCGGCGGCGATCGCGCTGTCATCGGGCG AGTTCCCGCCGCTGCCGCCGTCGAGCCCGCTCTCCTGGGGCCGCCTCACGCCGCAGCAGCACGTCGCGCTCGCGCCGTTC GCGAGTCAATGGGATTCGTTCAGCGACGAGCGCAAGCGCAAATGGCTGAAGATCGCGGCGCGCTTCCCGAGGATGTCGCC TGAAGCGCAAAAGCGCCTGCAGGAACGCATGACCGAGTGGGTGCGGATGACGCCCGAGCAGCGCCGTGTCGCGCGCGAAA ACTACCTGGTGTCGAAGGATCTGTCCGCGCAGGCTCGCGAGAAAGCCTGGAAGGCTTACCAACAGCTGTCGCCCGAGCAG AAGGAAAAGCTCGCCGCGGCCGAGCGCCGGCGCCGGCCGACGGTCGTCAGCGCGCCGCCCACCGGCAAGACCGATCGCGA CATCAACCGGCTCGTCAACGCGCACGACCGCCATCCGGCGAGCGCGCCCACCGCGAGCATCGCGCCGTCCGCGGCGAGCG CGCCCGCCGCGGCGCCCGTGCCGGCCTCGCCCGCGACGACGGGCGCCGTCACGCCGCCCACCGCGCCGACGCCCGTCTCG CCTTCCGAGGCGCCGTCGCTCTTCAACGGTTCGTAA
Upstream 100 bases:
>100_bases GAGCGACGACCTGCCTCTCACCGCGTACCTCGACCACGGGTTCAACGCGTACCTTTCGCATACTCACTAACGCCAACGCA TCAAGAAGAGGAACGCACGG
Downstream 100 bases:
>100_bases GCGCTCGTGATCGCGCCCGCGCTCCCGTCCGAGCCGCCGCCGCCGAGCGTGCGCCGCCGGCTCGCCGCGCTCGCGTACGA AGGCCTGCTGCTGTTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALSSGEFPPLPPSSPLSWGRLTPQQHVALAPF ASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQ KEKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS PSEAPSLFNGS
Sequences:
>Translated_251_residues MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALSSGEFPPLPPSSPLSWGRLTPQQHVALAPF ASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQ KEKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS PSEAPSLFNGS >Mature_250_residues SQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALSSGEFPPLPPSSPLSWGRLTPQQHVALAPFA SQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEWVRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQK EKLAAAERRRRPTVVSAPPTGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVSP SEAPSLFNGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27013; Mature: 26882
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALSSGEFPPLPP CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCC SSPLSWGRLTPQQHVALAPFASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEW CCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQKEKLAAAERRRRPTVVSAPP HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCC TGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSEAPSLFNGS CCCCCCCCCCC >Mature Secondary Structure SQKRGLAVFFGCVIALVVAYAATYPRFHPQPAAVAAASAPVIASAAIALSSGEFPPLPP CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCHHHHHHHHHHCCCCCCCCCC SSPLSWGRLTPQQHVALAPFASQWDSFSDERKRKWLKIAARFPRMSPEAQKRLQERMTEW CCCCCCCCCCHHHHEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH VRMTPEQRRVARENYLVSKDLSAQAREKAWKAYQQLSPEQKEKLAAAERRRRPTVVSAPP HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCC TGKTDRDINRLVNAHDRHPASAPTASIAPSAASAPAAAPVPASPATTGAVTPPTAPTPVS CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSEAPSLFNGS CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA