| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yfbI [C]
Identifier: 53718821
GI number: 53718821
Start: 1368695
End: 1370602
Strand: Reverse
Name: yfbI [C]
Synonym: BPSL1185
Alternate gene names: 53718821
Gene position: 1370602-1368695 (Counterclockwise)
Preceding gene: 53718822
Following gene: 53718802
Centisome position: 33.64
GC content: 71.33
Gene sequence:
>1908_bases ATGCAGGGAAATGCCTCGCCAGGCGGCCGGCGCACGACCGCTTCGGCGCAACGCGCCGGTTCGTCCGACAATCACTCGCG CTCGCCTTCGGTGGCGCTCGCCGCCGGCGCGCCGGGCACCGTCGGAGCGGCCGGCGAGCGCGCGATCGGATCGCGCGGCG CGGCGGCCACCCGCACCGCGCTCACCGGATGGCGTGCGTGGTTCGTCGCCGCGGCCGTGCTCTGCGCGTACCTGTTGCCG GGCATCCTCGGCCACGATCCGTGGAAGCAGGACGAAACCTACACGTTCGGCATCATCCAGCACATGCTCGAAAGCGGCGA TTTTGTCGTGCCGACCAACGCGGGGCAGCCGTTCCTCGAAAAGCCGCCGCTGTACGACTGGGTCGCCACCGGCTTCGCAT GGCTCTTTTCCCGCTTCCTGCCGCTGCACGACGCCGCCCGGCTTGCGAGCGCCCTCTTCGCCGCGCTCGCGTTCGGCTTC ACGGCCCGCGCCGCGCGCGTCGCGACGGGCGCGGCGCGCTGGCTCGAGTTGCCGGTGATCGGCACCGTCGCGCTGTGCGC AGGCTCGCTCGTCGTCATCAAGCATTCGCACGACCTGATGACCGACGTCGCGCTGATGGCGGGCGCCGCGATGGGCTTTT GCGGGCTGCTCGAACTCGTGATCCGGCACGCCGGCGACGCGTTCGGCGCGCGCGCCGAACGCCCGCCCGCGAACCGCTTC GCAGCCCCGCTCTTCGGCCTGGGCGTCGGCATCGCGCTGATGTCGAAGGGCCTGTTCGTGCCGCTCGTGTTCGGCGCGAC GCTTGCCGCGACGCTCGTCCTGTACCCCGCCTGCCGCAGCCGCGCGTTCTTCCGCTCGCTCGCGATCGCCGCGCTCGTGT GCGCGCCGTTCGCACTGATCTGGCCGACCGCGCTGTTCCTGCGCTCCGAATCGCTGTTCCTCGTCTGGTTCTGGGAAAAC AACGTCGGACGCTTCTTCGGTTTCTCGGTGCCGACGCTCGGCGCCGAGAACGACAAGCCGCTCTTCATCTGGCGCGCGCT GCTCACGGTCGGCTTCCCGGTCGCCCCGCTCGCGCTCGTCGCGCTCGCGCGCGGCCTCTGGCGCGACTGGCGCGCGCCGC GCGTCGCGCTGCCGCTCACGTTCGCGGGCATCGGGATGGTCGTGCTGCACATCTCCGCGACGTCGCGCCAACTGTACATC CTGCCGTTCATCGCGCCGCTCGCGCTCGTCGCCGCGCAGGCGATTCCACGCCTGCCGCAGCGCCTGCATGCCGCGTGGGA CTATGCGAGCCGGCTGCTGTTCGGCGCCGCCGCGGCGCTCGTGTGGATCGTCTGGTCACTGATGTCCGATCACGGTGGCC CGCGCGCCGGCTTGCAATGGCTCGGCCGCTGGCTGCCGCTCGACTGGACGATGCCGATCGAGCCCGCGCTCGTGCTGTCC GCGCTCGCGATCACGATCGGCTGGGTCGGCCTGCTGCCTTCGCTGCGGCTCGCGGGCAAGTGGCGCGGCGCGCTGTCGTG GGCGATGGGCGCGCTCGTCGCGTGGGGGCTCGTCTATACGCTGCTGCTGCCGTGGCTCGACGTCGCGAAGAGCTATCGTT CGGTGTTCGAAGATCTGAATCGCCGGCTCGCGCTCGAATGGAACGACGGCGACTGCATGGCGAGCGTCGATCTCGGCGAG TCGGAAGCGCCGATGCTCTACTACTTCTCCGGCGTGCTGCACCAGCCCGTCGCCCAGCCGAACGCGAGCGCCTGCACGTG GCTCATCGTGCAGGGTACGCGCGCGAATCCGCCGGTGCTCGACGCCGAATGGAAACCGTTCTGGGCGGGTGCCCGGCCGG GCGACGAGCAGGAGATGCTGCGCGTCTACGTGCGCACGCCCGCCGCGGCACGCCCCGCCCATCCGTGA
Upstream 100 bases:
>100_bases GACTGCGGCGCAAGCCGCGCACCTCGCTCCCGCCCGCTCGCGGCCGAAAAATCGGCCGGGCCATGCAGTCGGGCCGGCAC ACACGAAGAGATCACCCAGC
Downstream 100 bases:
>100_bases CGGCCGCGGTAATCGGCCACGATGCCGCGTCGCGCGAGGACGCTTCCCGGCCGCGCGACGCCGGCCGGCGCTGATTCATG CGCCGTTTCATGCGTCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyl Transferase Family Protein; Glycosyltransferase; Inner Membrane Protein; 4-Amino-4-Deoxy-L-Arabinose Transferase; Inner Membrane Transmembrane Protein; Glycosyl Transferase Family; Glycosyltransferase Pmt Family
Number of amino acids: Translated: 635; Mature: 635
Protein sequence:
>635_residues MQGNASPGGRRTTASAQRAGSSDNHSRSPSVALAAGAPGTVGAAGERAIGSRGAAATRTALTGWRAWFVAAAVLCAYLLP GILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVATGFAWLFSRFLPLHDAARLASALFAALAFGF TARAARVATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGAAMGFCGLLELVIRHAGDAFGARAERPPANRF AAPLFGLGVGIALMSKGLFVPLVFGATLAATLVLYPACRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWEN NVGRFFGFSVPTLGAENDKPLFIWRALLTVGFPVAPLALVALARGLWRDWRAPRVALPLTFAGIGMVVLHISATSRQLYI LPFIAPLALVAAQAIPRLPQRLHAAWDYASRLLFGAAAALVWIVWSLMSDHGGPRAGLQWLGRWLPLDWTMPIEPALVLS ALAITIGWVGLLPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVDLGE SEAPMLYYFSGVLHQPVAQPNASACTWLIVQGTRANPPVLDAEWKPFWAGARPGDEQEMLRVYVRTPAAARPAHP
Sequences:
>Translated_635_residues MQGNASPGGRRTTASAQRAGSSDNHSRSPSVALAAGAPGTVGAAGERAIGSRGAAATRTALTGWRAWFVAAAVLCAYLLP GILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVATGFAWLFSRFLPLHDAARLASALFAALAFGF TARAARVATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGAAMGFCGLLELVIRHAGDAFGARAERPPANRF AAPLFGLGVGIALMSKGLFVPLVFGATLAATLVLYPACRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWEN NVGRFFGFSVPTLGAENDKPLFIWRALLTVGFPVAPLALVALARGLWRDWRAPRVALPLTFAGIGMVVLHISATSRQLYI LPFIAPLALVAAQAIPRLPQRLHAAWDYASRLLFGAAAALVWIVWSLMSDHGGPRAGLQWLGRWLPLDWTMPIEPALVLS ALAITIGWVGLLPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVDLGE SEAPMLYYFSGVLHQPVAQPNASACTWLIVQGTRANPPVLDAEWKPFWAGARPGDEQEMLRVYVRTPAAARPAHP >Mature_635_residues MQGNASPGGRRTTASAQRAGSSDNHSRSPSVALAAGAPGTVGAAGERAIGSRGAAATRTALTGWRAWFVAAAVLCAYLLP GILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLEKPPLYDWVATGFAWLFSRFLPLHDAARLASALFAALAFGF TARAARVATGAARWLELPVIGTVALCAGSLVVIKHSHDLMTDVALMAGAAMGFCGLLELVIRHAGDAFGARAERPPANRF AAPLFGLGVGIALMSKGLFVPLVFGATLAATLVLYPACRSRAFFRSLAIAALVCAPFALIWPTALFLRSESLFLVWFWEN NVGRFFGFSVPTLGAENDKPLFIWRALLTVGFPVAPLALVALARGLWRDWRAPRVALPLTFAGIGMVVLHISATSRQLYI LPFIAPLALVAAQAIPRLPQRLHAAWDYASRLLFGAAAALVWIVWSLMSDHGGPRAGLQWLGRWLPLDWTMPIEPALVLS ALAITIGWVGLLPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLNRRLALEWNDGDCMASVDLGE SEAPMLYYFSGVLHQPVAQPNASACTWLIVQGTRANPPVLDAEWKPFWAGARPGDEQEMLRVYVRTPAAARPAHP
Specific function: Unknown
COG id: COG1807
COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
Gene ontology:
Cell location: Integral membrane protein (Potential) [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68377; Mature: 68377
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGNASPGGRRTTASAQRAGSSDNHSRSPSVALAAGAPGTVGAAGERAIGSRGAAATRTA CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCHHHHHH LTGWRAWFVAAAVLCAYLLPGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC KPPLYDWVATGFAWLFSRFLPLHDAARLASALFAALAFGFTARAARVATGAARWLELPVI CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH GTVALCAGSLVVIKHSHDLMTDVALMAGAAMGFCGLLELVIRHAGDAFGARAERPPANRF HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH AAPLFGLGVGIALMSKGLFVPLVFGATLAATLVLYPACRSRAFFRSLAIAALVCAPFALI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPTALFLRSESLFLVWFWENNVGRFFGFSVPTLGAENDKPLFIWRALLTVGFPVAPLALV HHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH ALARGLWRDWRAPRVALPLTFAGIGMVVLHISATSRQLYILPFIAPLALVAAQAIPRLPQ HHHHHHHHHCCCCEEEECHHHHHHEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH RLHAAWDYASRLLFGAAAALVWIVWSLMSDHGGPRAGLQWLGRWLPLDWTMPIEPALVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH ALAITIGWVGLLPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RRLALEWNDGDCMASVDLGESEAPMLYYFSGVLHQPVAQPNASACTWLIVQGTRANPPVL CEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEE DAEWKPFWAGARPGDEQEMLRVYVRTPAAARPAHP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MQGNASPGGRRTTASAQRAGSSDNHSRSPSVALAAGAPGTVGAAGERAIGSRGAAATRTA CCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCCCHHHHHH LTGWRAWFVAAAVLCAYLLPGILGHDPWKQDETYTFGIIQHMLESGDFVVPTNAGQPFLE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC KPPLYDWVATGFAWLFSRFLPLHDAARLASALFAALAFGFTARAARVATGAARWLELPVI CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH GTVALCAGSLVVIKHSHDLMTDVALMAGAAMGFCGLLELVIRHAGDAFGARAERPPANRF HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH AAPLFGLGVGIALMSKGLFVPLVFGATLAATLVLYPACRSRAFFRSLAIAALVCAPFALI HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WPTALFLRSESLFLVWFWENNVGRFFGFSVPTLGAENDKPLFIWRALLTVGFPVAPLALV HHHHHHHCCCCEEEEEEEECCCCCEECCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHH ALARGLWRDWRAPRVALPLTFAGIGMVVLHISATSRQLYILPFIAPLALVAAQAIPRLPQ HHHHHHHHHCCCCEEEECHHHHHHEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHH RLHAAWDYASRLLFGAAAALVWIVWSLMSDHGGPRAGLQWLGRWLPLDWTMPIEPALVLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH ALAITIGWVGLLPSLRLAGKWRGALSWAMGALVAWGLVYTLLLPWLDVAKSYRSVFEDLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RRLALEWNDGDCMASVDLGESEAPMLYYFSGVLHQPVAQPNASACTWLIVQGTRANPPVL CEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCEE DAEWKPFWAGARPGDEQEMLRVYVRTPAAARPAHP CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA