| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53718784
Identifier: 53718784
GI number: 53718784
Start: 1333198
End: 1333476
Strand: Reverse
Name: 53718784
Synonym: BPSL1149
Alternate gene names: NA
Gene position: 1333476-1333198 (Counterclockwise)
Preceding gene: 53718785
Following gene: 53718783
Centisome position: 32.73
GC content: 62.72
Gene sequence:
>279_bases ATGGCTAACCTCCGATGCCGTCCGGGCGACTTGGCCCGCGTTATTCGCGCATGGAATCCGGCTCTTGTCGGCCGCATCGT CTTGGTCGGCGCACTTCACTCGATCCGCGAGTCCGAATGGAATGTAACTCTACTCGGCGCCCCCGGCATGACGCTAACGA AGAACCGCAAGCGGCTCCGCATCGGCAATCGCATGCTCGCCCACGCCTCGTATCTTGAGCCGCTGCGCGGAGAAGAACTA CTCGGCCATGTCAGCGAACGGGAGGCCAGCCATGCCTGA
Upstream 100 bases:
>100_bases ACGACCGTTGCCAAAGAGGCCTCTCTTATCGCGCTCGAATACGGCGACATTGCGAGTACAGGACGGGGAGCATTCGAGGC ATCCCGCAAGGAGGTGCTCC
Downstream 100 bases:
>100_bases CCAGAAAATGCCCCGCGTCGAACGGGCTGTGCTGGAGGCGCGGGACAAATTCGCTCGCCTCGAAGCCCTGTTCCATGTGA TCAAAGAGCGCTTGGAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 91
Protein sequence:
>92_residues MANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPGMTLTKNRKRLRIGNRMLAHASYLEPLRGEEL LGHVSEREASHA
Sequences:
>Translated_92_residues MANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPGMTLTKNRKRLRIGNRMLAHASYLEPLRGEEL LGHVSEREASHA >Mature_91_residues ANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPGMTLTKNRKRLRIGNRMLAHASYLEPLRGEELL GHVSEREASHA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10245; Mature: 10114
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPGMTLTKNRKRLR CCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCHHH IGNRMLAHASYLEPLRGEELLGHVSEREASHA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC >Mature Secondary Structure ANLRCRPGDLARVIRAWNPALVGRIVLVGALHSIRESEWNVTLLGAPGMTLTKNRKRLR CCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCCCHHH IGNRMLAHASYLEPLRGEELLGHVSEREASHA HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA