Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718732

Identifier: 53718732

GI number: 53718732

Start: 1267966

End: 1269141

Strand: Reverse

Name: 53718732

Synonym: BPSL1097

Alternate gene names: NA

Gene position: 1269141-1267966 (Counterclockwise)

Preceding gene: 53718733

Following gene: 53718731

Centisome position: 31.15

GC content: 65.31

Gene sequence:

>1176_bases
ATGCTGATCGATTTTTTCTATTCGCTGCGTGCGGCGAAGCTGCCGGTGTCGGTCAAGGAATACCTGACGCTGCTCGAAGC
GCTGAAGGCGCAGGTGATCGAGCCGTCGCTCGACGCGTTCTACTTTCTCGCGCGCCTGACGCTCGTGAAGGACGAGCAGT
ACTTCGACAAGTTCGACAAGGCGTTCGGCGCGTACTTCCACGGCGTGTCCGCGCTGCCCGCGGACGCGTTCGACATCCCG
CTCGACTGGCTCGAAAAGCGCTTGCAACGCGAGCTCACGCCCGAGGAGAAGGCGCAGATCCAGGCGCTCGGCGGCCCCGA
CAAGCTGATGGAGCGCCTGAAGCAACTGCTCGACGAGCAGAAGGCGCGCCACGAAGGCGGCAACAAGTGGATCGGCACGG
GCGGCACGTCGCCGTTCGGGCACGGCGGCTACAACCCGGAGGGCGTCCGGATCGGCGGGCCGTCGAACGGCAACCGCACC
GCGGTCAAGGTATGGGAAGCGCGCGCGTATCGCGATTACGACGATTCGGTCGAAATCGGCACGCGCAACATCAAGGTCGC
GCTGCGGCGGCTGCGCCGCTTCGCGCGCGAAGGCGCGGCCGAGGAGCTCGATCTGCCCGGCACGATCCGCAGCACCGCCG
CGAACGCCGGCTGGCTCGATCTGCGGATGGTGCCCGAGCGCCACAACAACGTGAAGGTGCTGATGCTGCTAGACGTCGGC
GGCTCGATGGACGACCACATCAAGCGCACCGAGGAGCTCTTCTCCGCCGCGAAGGCCGAGTTCAAGCACCTCGAGTTCTA
TTACTTCCACAACTGCGTATACGACCATCTGTGGAAGAACAACCGCCGCCGTCACGCGGAGCGCACGCCGACCTGGGACG
TACTGCACAAGTTCACGCCCGATTACAAGCTGATCTTCGTCGGCGACGCAACGATGAGCCCGTACGAGGTGCTGCAGCCG
GGCGGCTCGGTCGAATACAACAATCCGGAGGCGGGCGCCGTGTGGCTGCGCCGTCTCGCCGATCAGTTCCCGCACTACGC
GTGGCTCAATCCGGAGCCCGAGCGGCTCTGGGAATACCGGCAGTCGATCGCGATCATCCGCGACGTGCTCGGCGACCGGA
TGTATCCGCTCACGCTCGCGGGCCTCGAATCCGCGATGCGCACGCTGAGCAAGTGA

Upstream 100 bases:

>100_bases
CGCCCGACGCGGGCGCGCTGCGGCCCGCCGGCGGCTTGCGGCACGCCGGTGCGCCGCCGCTTGGCCGCCCGGCTCGCCGC
GACGATCCGAGGGCCCGCCG

Downstream 100 bases:

>100_bases
CGCGCCCGCCGCGCCCGCCGCGCGCGTCGCCCCGCCGATTCCGCCGTTTTTCAACGCCTCACCTTCACCACCCCGGACCC
GACGTTTCACCGATGAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLEALKAQVIEPSLDAFYFLARLTLVKDEQYFDKFDKAFGAYFHGVSALPADAFDIP
LDWLEKRLQRELTPEEKAQIQALGGPDKLMERLKQLLDEQKARHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFYYFHNCVYDHLWKNNRRRHAERTPTWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHYAWLNPEPERLWEYRQSIAIIRDVLGDRMYPLTLAGLESAMRTLSK

Sequences:

>Translated_391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLEALKAQVIEPSLDAFYFLARLTLVKDEQYFDKFDKAFGAYFHGVSALPADAFDIP
LDWLEKRLQRELTPEEKAQIQALGGPDKLMERLKQLLDEQKARHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFYYFHNCVYDHLWKNNRRRHAERTPTWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHYAWLNPEPERLWEYRQSIAIIRDVLGDRMYPLTLAGLESAMRTLSK
>Mature_391_residues
MLIDFFYSLRAAKLPVSVKEYLTLLEALKAQVIEPSLDAFYFLARLTLVKDEQYFDKFDKAFGAYFHGVSALPADAFDIP
LDWLEKRLQRELTPEEKAQIQALGGPDKLMERLKQLLDEQKARHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRT
AVKVWEARAYRDYDDSVEIGTRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
GSMDDHIKRTEELFSAAKAEFKHLEFYYFHNCVYDHLWKNNRRRHAERTPTWDVLHKFTPDYKLIFVGDATMSPYEVLQP
GGSVEYNNPEAGAVWLRRLADQFPHYAWLNPEPERLWEYRQSIAIIRDVLGDRMYPLTLAGLESAMRTLSK

Specific function: Unknown

COG id: COG3825

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44851; Mature: 44851

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDFFYSLRAAKLPVSVKEYLTLLEALKAQVIEPSLDAFYFLARLTLVKDEQYFDKFDK
CEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
AFGAYFHGVSALPADAFDIPLDWLEKRLQRELTPEEKAQIQALGGPDKLMERLKQLLDEQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHH
KARHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRTAVKVWEARAYRDYDDSVEIG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIKRTEELFSAAKAEFKHLEFYYFHNCVYDHLWKNNRRRHAERTPTWDVLHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCC
DYKLIFVGDATMSPYEVLQPGGSVEYNNPEAGAVWLRRLADQFPHYAWLNPEPERLWEYR
CEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSIAIIRDVLGDRMYPLTLAGLESAMRTLSK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIDFFYSLRAAKLPVSVKEYLTLLEALKAQVIEPSLDAFYFLARLTLVKDEQYFDKFDK
CEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHH
AFGAYFHGVSALPADAFDIPLDWLEKRLQRELTPEEKAQIQALGGPDKLMERLKQLLDEQ
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHEEECCCHHHHHHHHHHHHHHH
KARHEGGNKWIGTGGTSPFGHGGYNPEGVRIGGPSNGNRTAVKVWEARAYRDYDDSVEIG
HHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEEHHHHCCCCCCHHHC
TRNIKVALRRLRRFAREGAAEELDLPGTIRSTAANAGWLDLRMVPERHNNVKVLMLLDVG
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCEEEEEEEECC
GSMDDHIKRTEELFSAAKAEFKHLEFYYFHNCVYDHLWKNNRRRHAERTPTWDVLHKFTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHCCC
DYKLIFVGDATMSPYEVLQPGGSVEYNNPEAGAVWLRRLADQFPHYAWLNPEPERLWEYR
CEEEEEEECCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
QSIAIIRDVLGDRMYPLTLAGLESAMRTLSK
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA