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The map label for this gene is ybcL [H]

Identifier: 53718690

GI number: 53718690

Start: 1219023

End: 1219535

Strand: Reverse

Name: ybcL [H]

Synonym: BPSL1049

Alternate gene names: 53718690

Gene position: 1219535-1219023 (Counterclockwise)

Preceding gene: 53718691

Following gene: 53718689

Centisome position: 29.93

GC content: 66.28

Gene sequence:

>513_bases
ATGGCTGATTTCCGGCTTTGGACTGACGAGTTTCCGGCCAACGGCTTCATGCCGAAGGCACAAGAGTACAAACACGAAGG
CTTCGGCGTCGACGGCGGCAACCGCTCGCCCGCGCTCCATTGGGAAGGCGTGCCCGCCGATGCGAAGAGCCTCGCGCTCA
CCGTCTACGATCCCGATGCGCCGACGGGCAGCGGCTTCTGGCACTGGGCCGTCGTCAACATCCCGGTCGACACGGCGGGC
CTGCCGCAGGACGCGGGCGCGGCGGGTAGCGCGGCGCTGCCCGCCGGCGCCGTGCAGGTGCGCAACGACTACGGCGACGA
AGGCTTCGGCGGCGCCGCGCCGCCGCGCGGCGACAAGCCGCATCGCTACATCTTCCGGCTGCACGCGCTGAAGGTCGATT
CGCTGCCCGTCACGAAGGAGACCACCAACGCGGTCGCCCGCTTCATGATCCATCTGAACGAAATCGATTCGGCAACCTAC
ACCGGTCTCTACGAATTGAAGGAACTGAAGTAA

Upstream 100 bases:

>100_bases
GCGCCGGTGATACACTCGACCGGCTTAACGCCGGTGCTCGCGCGCGTACGTCGCCGCGGCGCGCAGGCGTCACTCTGTCG
AACTTCACAAGGAGGCCCCC

Downstream 100 bases:

>100_bases
TCCGCCCCGGCCGGGCGCTGCGCCCGGCCCTCGCCGCCGGCCGCACGGCTCGCCCGCGCATGCCGGCGGTTGCGTGCGCA
ACGGACTCGCCGCCCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MADFRLWTDEFPANGFMPKAQEYKHEGFGVDGGNRSPALHWEGVPADAKSLALTVYDPDAPTGSGFWHWAVVNIPVDTAG
LPQDAGAAGSAALPAGAVQVRNDYGDEGFGGAAPPRGDKPHRYIFRLHALKVDSLPVTKETTNAVARFMIHLNEIDSATY
TGLYELKELK

Sequences:

>Translated_170_residues
MADFRLWTDEFPANGFMPKAQEYKHEGFGVDGGNRSPALHWEGVPADAKSLALTVYDPDAPTGSGFWHWAVVNIPVDTAG
LPQDAGAAGSAALPAGAVQVRNDYGDEGFGGAAPPRGDKPHRYIFRLHALKVDSLPVTKETTNAVARFMIHLNEIDSATY
TGLYELKELK
>Mature_169_residues
ADFRLWTDEFPANGFMPKAQEYKHEGFGVDGGNRSPALHWEGVPADAKSLALTVYDPDAPTGSGFWHWAVVNIPVDTAGL
PQDAGAAGSAALPAGAVQVRNDYGDEGFGGAAPPRGDKPHRYIFRLHALKVDSLPVTKETTNAVARFMIHLNEIDSATYT
GLYELKELK

Specific function: Unknown

COG id: COG1881

COG function: function code R; Phospholipid-binding protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0098 family [H]

Homologues:

Organism=Escherichia coli, GI1786757, Length=166, Percent_Identity=49.3975903614458, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1786990, Length=145, Percent_Identity=46.8965517241379, Blast_Score=140, Evalue=4e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008914
- InterPro:   IPR005247 [H]

Pfam domain/function: PF01161 PBP [H]

EC number: NA

Molecular weight: Translated: 18353; Mature: 18221

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADFRLWTDEFPANGFMPKAQEYKHEGFGVDGGNRSPALHWEGVPADAKSLALTVYDPDA
CCCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCC
PTGSGFWHWAVVNIPVDTAGLPQDAGAAGSAALPAGAVQVRNDYGDEGFGGAAPPRGDKP
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
HRYIFRLHALKVDSLPVTKETTNAVARFMIHLNEIDSATYTGLYELKELK
CEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEEEEECCC
>Mature Secondary Structure 
ADFRLWTDEFPANGFMPKAQEYKHEGFGVDGGNRSPALHWEGVPADAKSLALTVYDPDA
CCCEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEEEEEEECCCC
PTGSGFWHWAVVNIPVDTAGLPQDAGAAGSAALPAGAVQVRNDYGDEGFGGAAPPRGDKP
CCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
HRYIFRLHALKVDSLPVTKETTNAVARFMIHLNEIDSATYTGLYELKELK
CEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 11439028 [H]