| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is hisM [H]
Identifier: 53718671
GI number: 53718671
Start: 1201221
End: 1201934
Strand: Reverse
Name: hisM [H]
Synonym: BPSL1031
Alternate gene names: 53718671
Gene position: 1201934-1201221 (Counterclockwise)
Preceding gene: 53718672
Following gene: 53718670
Centisome position: 29.5
GC content: 64.29
Gene sequence:
>714_bases ATGATCGAGCTGATCCAAGAATACTGGCGCAACTACCTGTATACGGACGGGTATCGCTTCACCGGCCTCGCGATCACGAT GTGGCTGCTCGTCGTGTCGATCGGCATCGGCTTCTGTCTGTCCGTGCCGCTCGCGGTCGCGCGCGTGTCGAAGAAGAAGT GGCTCGCGGGCGCGGTCTGGCTCTACACGTACGTGTTCCGCGGCACGCCGCTCTACGTGCAGCTCCTGCTCTGCTACACG GGCCTTTACAGCCTGCAGGCCGTGCGCGGCACGCCGATGCTCGACGCGTTCTTTCGCGACGGGATGAACTGCACGCTGCT CGCGTTCACGCTGAACACCTGCGCGTACACGACCGAAATCTTCGCGGGCGCGATCAAGGCGACGTCGTACGGCGAGATCG AGGCGGCCCGCGCTTACGGGATGTCGACCTTCACGCTGTATCGCCGGATCGTGCTGCCTTCGGCGCTGCGCCGCGCGCTG CCGCTCTACAGCAACGAGGTGATCCTGATGCTGCATGCGACGACGGTCGCGTTCACGGCGACCGTGCCCGATATCCTGAA GATCGCGCGCGACGTCAATTCGGCGACCTACATGTCGTTCCACGCGTTCGGCATCGCCGCCCTTCTCTACCTCGCGATCT CGTTTACGCTCGTGTGGCTGTTCCGCCGCGCCGAACGCCGCTGGCTCGCGTATCTGCGCCCGCAAGGCAAATGA
Upstream 100 bases:
>100_bases TGCTCGCCGGCGCGATCTATCTCGCGATCACGACGATCTCGAACTTCGTGCTGATGTGGCTCGAGAAGCGTTATTCGACC GGCGTACGCAAGGCGGACCT
Downstream 100 bases:
>100_bases GTTTCGCCCGGACATGCCTCAGATGAATACCCAGATGCACAAGCTCTTCGTCGACGACCTCCACAAGCGCTACGGCAACA ACGAAGTTTTGAAGGGCGTC
Product: histidine transport system permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK
Sequences:
>Translated_237_residues MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK >Mature_237_residues MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVWLYTYVFRGTPLYVQLLLCYT GLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEIFAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRAL PLYSNEVILMLHATTVAFTATVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4160
COG function: function code E; ABC-type arginine/histidine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788645, Length=236, Percent_Identity=66.5254237288136, Blast_Score=335, Evalue=1e-93, Organism=Escherichia coli, GI1787086, Length=212, Percent_Identity=33.4905660377358, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788226, Length=209, Percent_Identity=31.1004784688995, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787030, Length=208, Percent_Identity=28.8461538461538, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI1786873, Length=224, Percent_Identity=29.0178571428571, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1788646, Length=218, Percent_Identity=27.0642201834862, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1787087, Length=218, Percent_Identity=25.2293577981651, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI48994930, Length=184, Percent_Identity=27.1739130434783, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26883; Mature: 26883
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW CHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHH FAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIELIQEYWRNYLYTDGYRFTGLAITMWLLVVSIGIGFCLSVPLAVARVSKKKWLAGAVW CHHHHHHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LYTYVFRGTPLYVQLLLCYTGLYSLQAVRGTPMLDAFFRDGMNCTLLAFTLNTCAYTTEI HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEEHHHHHHHHHH FAGAIKATSYGEIEAARAYGMSTFTLYRRIVLPSALRRALPLYSNEVILMLHATTVAFTA HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHH TVPDILKIARDVNSATYMSFHAFGIAALLYLAISFTLVWLFRRAERRWLAYLRPQGK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]