Click here to switch to the map view.

The map label for this gene is cc4 [H]

Identifier: 53718340

GI number: 53718340

Start: 794567

End: 795328

Strand: Reverse

Name: cc4 [H]

Synonym: BPSL0697

Alternate gene names: 53718340

Gene position: 795328-794567 (Counterclockwise)

Preceding gene: 53718342

Following gene: 53718339

Centisome position: 19.52

GC content: 70.47

Gene sequence:

>762_bases
ATGGAGTCCCGTGTGTCTTCTAGACGCCTTTTCCGTCCGCTGCTCGCCGTTGTGTTGATGGGCGCAGCGGGTCTTCTGAG
CACTGCGCACGCGCAGACCAAGCCCACCGAGCCGGCCGCCGCGAAGGCGCCCCTGAAGGCGCCCGACACGATGGCGGAGC
GCGTGCGCGGCTGCACGGCCTGTCACGGCACGCACGGGCAGGGCACCGACAACGACTACTTCCCGCGTCTGGCTGGCAAG
CCGGCCGAGTACCTGTACAACCAGCTCGTGAACTTCCGCGACGGTCGCCGCAAGTACCCGCCGATGAACTATCTGCTCAC
GTACCTGAGCGACGATTACCTGCGCGAGATCGCGCAGCACTTCTCGGACGAGCGCCCGCCGTACCCGGCGCCGACCAAGC
CGACGGTGCCCGCCGCCGTGGTCGAGCGCGGCAAGCAGCTCGCGCTGCACGGCGATCCGGCGCGCAAGCTGCCCGCGTGC
GTCGCGTGCCACGGCAACGGGCTCACCGGCATGCAGCCCGCGATTCCCGGCCTCGTCGGCCTGCACAGCGACTATCTGAG
CGCGCAGATCGGCGCGTGGCGCTCGGGCACGCGTCATGCGAAAGCGCCCGACTGCATGCACGACGTCGCGAGCAAGCTGT
CCGACGAGGACGTGACCGCCGTGACCGCGTGGCTCGCCGCGCAGCCGGCGCCCGCCAACCCCGTGCCGGCCCCGGCCCGC
TCGATGAAGACTCCGCTCGCCTGCGGCAGCGAACCGCAATAA

Upstream 100 bases:

>100_bases
ATAGAATTCCGCGTCGCAGCAGCCCGGCTGCCTGCCCCTCGTGAGTTCTTGCCGTCATGCCGAGCCAATCGGAGCCCGGT
CAGGTCCCCGACGAATAACA

Downstream 100 bases:

>100_bases
GGCAAGGGAGACAGACACAATGAAACGCAAGTCCCTGTTTGCACTCTCGGCTGTCGCGATCGTCGCGGCAGCGGCTCTCG
TGCCCGTCCTGTGGCCGGGC

Product: putative periplasmic cytochrome c protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MESRVSSRRLFRPLLAVVLMGAAGLLSTAHAQTKPTEPAAAKAPLKAPDTMAERVRGCTACHGTHGQGTDNDYFPRLAGK
PAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAQHFSDERPPYPAPTKPTVPAAVVERGKQLALHGDPARKLPAC
VACHGNGLTGMQPAIPGLVGLHSDYLSAQIGAWRSGTRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPAR
SMKTPLACGSEPQ

Sequences:

>Translated_253_residues
MESRVSSRRLFRPLLAVVLMGAAGLLSTAHAQTKPTEPAAAKAPLKAPDTMAERVRGCTACHGTHGQGTDNDYFPRLAGK
PAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAQHFSDERPPYPAPTKPTVPAAVVERGKQLALHGDPARKLPAC
VACHGNGLTGMQPAIPGLVGLHSDYLSAQIGAWRSGTRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPAR
SMKTPLACGSEPQ
>Mature_253_residues
MESRVSSRRLFRPLLAVVLMGAAGLLSTAHAQTKPTEPAAAKAPLKAPDTMAERVRGCTACHGTHGQGTDNDYFPRLAGK
PAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAQHFSDERPPYPAPTKPTVPAAVVERGKQLALHGDPARKLPAC
VACHGNGLTGMQPAIPGLVGLHSDYLSAQIGAWRSGTRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPAR
SMKTPLACGSEPQ

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 27151; Mature: 27151

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS51007 CYTC L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESRVSSRRLFRPLLAVVLMGAAGLLSTAHAQTKPTEPAAAKAPLKAPDTMAERVRGCTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CHGTHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAQH
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHH
FSDERPPYPAPTKPTVPAAVVERGKQLALHGDPARKLPACVACHGNGLTGMQPAIPGLVG
HCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHCCEEEEECCCCCCCCCHHHHHHHH
LHSDYLSAQIGAWRSGTRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPAR
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHH
SMKTPLACGSEPQ
HHCCCCCCCCCCC
>Mature Secondary Structure
MESRVSSRRLFRPLLAVVLMGAAGLLSTAHAQTKPTEPAAAKAPLKAPDTMAERVRGCTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CHGTHGQGTDNDYFPRLAGKPAEYLYNQLVNFRDGRRKYPPMNYLLTYLSDDYLREIAQH
HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHH
FSDERPPYPAPTKPTVPAAVVERGKQLALHGDPARKLPACVACHGNGLTGMQPAIPGLVG
HCCCCCCCCCCCCCCCCHHHHHCCCEEEECCCCHHHCCEEEEECCCCCCCCCHHHHHHHH
LHSDYLSAQIGAWRSGTRHAKAPDCMHDVASKLSDEDVTAVTAWLAAQPAPANPVPAPAR
HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHH
SMKTPLACGSEPQ
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]