| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718267
Identifier: 53718267
GI number: 53718267
Start: 706710
End: 707624
Strand: Reverse
Name: 53718267
Synonym: BPSL0624
Alternate gene names: NA
Gene position: 707624-706710 (Counterclockwise)
Preceding gene: 53718270
Following gene: 53718264
Centisome position: 17.37
GC content: 70.38
Gene sequence:
>915_bases ATGGAACCCCTCACACTCGTTGCCGGGCCGCCGCTGTCGGCCGAGGATCTCGACACGCTGCGGCGCGCGAAGCTCGCGCT CGAGAGCCCGTCGCTCACGATCAAGCTGACGAGCGTCGTCGGCGCGCCGGTCGAGAAGATGATCGGCAAGCTGCCCGGCT TCGCGACCGACAAGATCAACGACGCGACGCAGCTCGCGCTGCGCAAGTGCCTGCACATCGCGCTGCGCACGCTCGGCAAG TCGGGCGGCGTCGCGAGCGCGGGCGAGACGCCGGGCAAGCCGAGCAACCTGCTGCACAAGCTCGCCGTCGCGACGACGGG TGCGGCGGGCGGCGCGTTCGGCCTGTTCGCGCTGCCCGTCGAGCTGCCCGTCACGACGACGCTGATGTTCCGCTCGATCT GCGACATCGCGCGCAGCGAGGGCGAGGATCTGTCGAGCGCCGAGACGCAGTTGCAATGCCTCGCGGTGCTCGGCATGGGC GGCGGCTTCGGCCCGTTGCCGGGCGCGGGCAAGGACGACGGCCAAGCGGACGGCGACGCCGGCGGCGAGCGCGACAAAAA GGAGGAGGACGCCGACATCGGCTATTTCGTGCTGCGCGGCGCGCTCGCGCAGGCGGTGTCGAAGGCGTCGTCGGAAATCG CTTCGAAAGGTTTCGCGACACACGGCTCGGCCGCGCTGCTGCGCCTCGTGCAGTCGATCGCGTCGCGCTTCTCGGTGCAG GTGACCGAGCAGATCGCCGCGAAGTCGATTCCCGCGATCGGCGCCGTGCTCGGCGCGACCGTCAACACGCTCTTCATCGA TCATTTCCAGCAGGCCGCGCACGGCCACTTCGCGGTGCGCCGGCTCGAGCGCAAGTACGGGCAGCCGGCCGTGAAGGCCG CGTATCAGGCGATCGACGCGTCGGCCGTGCGCTGA
Upstream 100 bases:
>100_bases TTCGTGCAACTTTTGATGCGTCAACGAATCGAAAATTCTATCATGCATCAGGTAATCTAGCCGGCGCCACCATGCGACGC GCGCGTCGCGAAGGAGTCAG
Downstream 100 bases:
>100_bases GTCGCGCGCTCGACCGCGGTGCGCCGCACGAACGCGGCCGCGCGCTCGAGCGCACGCGCCGATTCGGGCACGAACGGCAC AAAGATCTGCCAGACGTGCG
Product: putative protease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 304
Protein sequence:
>304_residues MEPLTLVAGPPLSAEDLDTLRRAKLALESPSLTIKLTSVVGAPVEKMIGKLPGFATDKINDATQLALRKCLHIALRTLGK SGGVASAGETPGKPSNLLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLSSAETQLQCLAVLGMG GGFGPLPGAGKDDGQADGDAGGERDKKEEDADIGYFVLRGALAQAVSKASSEIASKGFATHGSAALLRLVQSIASRFSVQ VTEQIAAKSIPAIGAVLGATVNTLFIDHFQQAAHGHFAVRRLERKYGQPAVKAAYQAIDASAVR
Sequences:
>Translated_304_residues MEPLTLVAGPPLSAEDLDTLRRAKLALESPSLTIKLTSVVGAPVEKMIGKLPGFATDKINDATQLALRKCLHIALRTLGK SGGVASAGETPGKPSNLLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLSSAETQLQCLAVLGMG GGFGPLPGAGKDDGQADGDAGGERDKKEEDADIGYFVLRGALAQAVSKASSEIASKGFATHGSAALLRLVQSIASRFSVQ VTEQIAAKSIPAIGAVLGATVNTLFIDHFQQAAHGHFAVRRLERKYGQPAVKAAYQAIDASAVR >Mature_304_residues MEPLTLVAGPPLSAEDLDTLRRAKLALESPSLTIKLTSVVGAPVEKMIGKLPGFATDKINDATQLALRKCLHIALRTLGK SGGVASAGETPGKPSNLLHKLAVATTGAAGGAFGLFALPVELPVTTTLMFRSICDIARSEGEDLSSAETQLQCLAVLGMG GGFGPLPGAGKDDGQADGDAGGERDKKEEDADIGYFVLRGALAQAVSKASSEIASKGFATHGSAALLRLVQSIASRFSVQ VTEQIAAKSIPAIGAVLGATVNTLFIDHFQQAAHGHFAVRRLERKYGQPAVKAAYQAIDASAVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31352; Mature: 31352
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLTLVAGPPLSAEDLDTLRRAKLALESPSLTIKLTSVVGAPVEKMIGKLPGFATDKIN CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHCCCCCCCCCC DATQLALRKCLHIALRTLGKSGGVASAGETPGKPSNLLHKLAVATTGAAGGAFGLFALPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECC ELPVTTTLMFRSICDIARSEGEDLSSAETQLQCLAVLGMGGGFGPLPGAGKDDGQADGDA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GGERDKKEEDADIGYFVLRGALAQAVSKASSEIASKGFATHGSAALLRLVQSIASRFSVQ CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VTEQIAAKSIPAIGAVLGATVNTLFIDHFQQAAHGHFAVRRLERKYGQPAVKAAYQAIDA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SAVR HCCC >Mature Secondary Structure MEPLTLVAGPPLSAEDLDTLRRAKLALESPSLTIKLTSVVGAPVEKMIGKLPGFATDKIN CCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCHHHHHHHCCCCCCCCCC DATQLALRKCLHIALRTLGKSGGVASAGETPGKPSNLLHKLAVATTGAAGGAFGLFALPV HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHEECC ELPVTTTLMFRSICDIARSEGEDLSSAETQLQCLAVLGMGGGFGPLPGAGKDDGQADGDA CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC GGERDKKEEDADIGYFVLRGALAQAVSKASSEIASKGFATHGSAALLRLVQSIASRFSVQ CCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH VTEQIAAKSIPAIGAVLGATVNTLFIDHFQQAAHGHFAVRRLERKYGQPAVKAAYQAIDA HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH SAVR HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA