Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53718256

Identifier: 53718256

GI number: 53718256

Start: 694181

End: 695155

Strand: Reverse

Name: 53718256

Synonym: BPSL0613

Alternate gene names: NA

Gene position: 695155-694181 (Counterclockwise)

Preceding gene: 53718257

Following gene: 53718255

Centisome position: 17.06

GC content: 66.46

Gene sequence:

>975_bases
TTGAACGACATGACCCAACCTTCCGTGCGCGCGGCCGAAACGGCCGACGCGCCCATCGATCGCAGCGGCGTGAACAAGCT
GCGCGACGAGCTCGTCGAAGCGGGGCTGCTGATTTCGACGGGCATCCAGGGCCTGTTCGGCCGCAGCGAGCGGTTCGAGC
GCGTCGTCGACGCGCTCGACGCCTACATCACGCGCCTCGGCGCCGATCAGCATGCGGAAGTGCTGCGTTTTCCGCCGGCG
ATGAGCCGCCCCGAGTTCGAGCGCAGCGAATACCTGAAGAGCTTCCCGCAACTCGCGGGCACCGTGCACAGCTTCTGCGG
CAACGAACACGACCATCAGCGCGTGCTGCAATGCCTCGACCGCGGCGACGACTGGACCGAAAGCCAGAAGCCGACCTACG
TCGTGATGACGCCCGCCGCGTGCTATCCGGTCTACCCGGTTCTCGCGCAGCGCGGCGCGTTGCCCGAGGACGGTCGCATC
GTCGACGCATTCTCGTACTGCTTCCGGCACGAGCCGTCGCTCGACCCGACGCGCATGCAGCTCTTCAGGATGCGCGAGTA
TATCCGCGTCGGCACGCCCGAGCAGATCCTCGCGTTCCGCCAGGACTGGATCGAGCGCGGCACGCGGATGATCGACGCGC
TGCAGTTGCCGAACAGCATCGATCTCGCGAACGACCCGTTCTTCGGCCGCGGCGGCAAGATCGTCGCGAGCAGCCAGCGC
GATCAGAACCTGAAGTTCGAACTGCTGATTCCGATCGAATACGACGCACGCCTGACCGCGTGCCTGAGCTTCAACTACCA
CATGGATCACTTCGGCCTGCTGTGGGGCATCAAGACCGCGGACGCCGCGGTCGCGCACACGGGCTGCGTCGGCTTCGGCC
TCGAGCGTCTCACGCTCGGCCTCTTCAGGCATCACGGCCTCGATCCGCACGCGTGGCCGCAGGCGGTGCGCGACGTACTG
TGGGGACATCGATGA

Upstream 100 bases:

>100_bases
ACCTGCATTCGGCGCCGCTCATGATCAGCAACGACCGCATCGAGGCGAACACGGCCAACCTGTTGCTCGCACTGCGTCCC
GCCACGCTTGAAAGAGAGAT

Downstream 100 bases:

>100_bases
GCAGCATCCTGCTCGACGCGCCGGGCAACGGCGCGTCGCTCGAAGACATCTTCACCGACATCCGGCATCGCGTGCGGCAC
TACCGGCCGCATGCGCTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: Amino acid:[carrier-protein] ligase [AMP forming]; aa:CP ligase; Aminoacyl-[acyl-carrier-protein] synthetase; L-alanine:[acyl-carrier-protein] ligase; L-glycine:[acyl-carrier-protein] ligase; L-serine:[acyl-carrier-protein] ligase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MNDMTQPSVRAAETADAPIDRSGVNKLRDELVEAGLLISTGIQGLFGRSERFERVVDALDAYITRLGADQHAEVLRFPPA
MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVLAQRGALPEDGRI
VDAFSYCFRHEPSLDPTRMQLFRMREYIRVGTPEQILAFRQDWIERGTRMIDALQLPNSIDLANDPFFGRGGKIVASSQR
DQNLKFELLIPIEYDARLTACLSFNYHMDHFGLLWGIKTADAAVAHTGCVGFGLERLTLGLFRHHGLDPHAWPQAVRDVL
WGHR

Sequences:

>Translated_324_residues
MNDMTQPSVRAAETADAPIDRSGVNKLRDELVEAGLLISTGIQGLFGRSERFERVVDALDAYITRLGADQHAEVLRFPPA
MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVLAQRGALPEDGRI
VDAFSYCFRHEPSLDPTRMQLFRMREYIRVGTPEQILAFRQDWIERGTRMIDALQLPNSIDLANDPFFGRGGKIVASSQR
DQNLKFELLIPIEYDARLTACLSFNYHMDHFGLLWGIKTADAAVAHTGCVGFGLERLTLGLFRHHGLDPHAWPQAVRDVL
WGHR
>Mature_324_residues
MNDMTQPSVRAAETADAPIDRSGVNKLRDELVEAGLLISTGIQGLFGRSERFERVVDALDAYITRLGADQHAEVLRFPPA
MSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLDRGDDWTESQKPTYVVMTPAACYPVYPVLAQRGALPEDGRI
VDAFSYCFRHEPSLDPTRMQLFRMREYIRVGTPEQILAFRQDWIERGTRMIDALQLPNSIDLANDPFFGRGGKIVASSQR
DQNLKFELLIPIEYDARLTACLSFNYHMDHFGLLWGIKTADAAVAHTGCVGFGLERLTLGLFRHHGLDPHAWPQAVRDVL
WGHR

Specific function: Catalyzes the ATP-dependent activation of L-alanine, and to a lesser extent of L-glycine and L-serine, and their transfer to the phosphopantetheine prosthetic group covalently attached to the vicinal carrier protein Atu2571 of yet unknown function. May pa

COG id: COG0172

COG function: function code J; Seryl-tRNA synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family. Amino acid--[acyl-carrier-protein] ligase subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36698; Mature: 36698

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDMTQPSVRAAETADAPIDRSGVNKLRDELVEAGLLISTGIQGLFGRSERFERVVDALD
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHCHHHHHCCHHHHHHHHHHHH
AYITRLGADQHAEVLRFPPAMSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLD
HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RGDDWTESQKPTYVVMTPAACYPVYPVLAQRGALPEDGRIVDAFSYCFRHEPSLDPTRMQ
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
LFRMREYIRVGTPEQILAFRQDWIERGTRMIDALQLPNSIDLANDPFFGRGGKIVASSQR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCC
DQNLKFELLIPIEYDARLTACLSFNYHMDHFGLLWGIKTADAAVAHTGCVGFGLERLTLG
CCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LFRHHGLDPHAWPQAVRDVLWGHR
HHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNDMTQPSVRAAETADAPIDRSGVNKLRDELVEAGLLISTGIQGLFGRSERFERVVDALD
CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHCHHHHHCCHHHHHHHHHHHH
AYITRLGADQHAEVLRFPPAMSRPEFERSEYLKSFPQLAGTVHSFCGNEHDHQRVLQCLD
HHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RGDDWTESQKPTYVVMTPAACYPVYPVLAQRGALPEDGRIVDAFSYCFRHEPSLDPTRMQ
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
LFRMREYIRVGTPEQILAFRQDWIERGTRMIDALQLPNSIDLANDPFFGRGGKIVASSQR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCC
DQNLKFELLIPIEYDARLTACLSFNYHMDHFGLLWGIKTADAAVAHTGCVGFGLERLTLG
CCCCEEEEEEEECCCCEEEEEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LFRHHGLDPHAWPQAVRDVLWGHR
HHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]