| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718167
Identifier: 53718167
GI number: 53718167
Start: 581037
End: 581669
Strand: Reverse
Name: 53718167
Synonym: BPSL0528
Alternate gene names: NA
Gene position: 581669-581037 (Counterclockwise)
Preceding gene: 53718168
Following gene: 53718164
Centisome position: 14.28
GC content: 66.67
Gene sequence:
>633_bases ATGTCCTCTCTGTCGACCACGCTCATCGATTTGCCGCTCTTCCCGCTGCATACGGTGTTGTTCCCGGGAGGGCTGCTGCC GCTGAAAGTCTTCGAAGCGCGTTATCTGGACATGGCGCGCGCCTGCCTGCGCGACGACGCGCCGTTCGGCGTGTGCCTGC TGAAGAGCGGCCCGGAGGTCGCTCAGGAAGGCGAAGTATCGGTACCCGAGACGATCGGCTGCATGGCGCGGATCGTCGAA TGCGATACCGGCGAATTCGGGATGCTGCTCCTGCGCACGATCGGCACGCAGCGCTTCGAGCTGCTGTCGCATCGGGTCGA GGCAAACGGCCTGCTCGTCGGCATCGCCGAGCCGATGCAGGAAGACATCCCGCTCGAGGGCGACAGCGCGCTCGCGCAAT TCGGCGCGTGCGCCGAAGCGCTCGAGCGGATCGTCGAGGTGCTGCGCAGGTCCGACGCCGAGCTGCCGTTCGCGGAGCCG TTCCGCTTCGACGACCCGACATGGGTGTCGAACCGGCTCGCCGAAGTGCTGCCGCTCGATCTGCGCGCGCGGCAGAAGCT GATGGAATTTCCCGATGTCGGCGCGCGCATCGACGCCGTGCATCGGGAGCTGAATCGGCACGGGTGGCTGTAG
Upstream 100 bases:
>100_bases GGCAGGCCAGCGTGATCGTGCGGCATCGTGACGCGCCCGTCGCCGTGGACGCGTCGTCGCGGCTCGTGACCTAGCGCCGC TCACCTTTTCCGGGCCCGCC
Downstream 100 bases:
>100_bases GCGCGCAGCGGCGCGCCGGTTGACGCGCGGTTCGCGGCAAGGCCCGCGCAACGCGTGTGGGGTGCGCGGCGCGTGCGGTG GAAATCGTGCGTCGAACGGG
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Dependent Protease La; Peptidase S; Endopeptidase; ATP-Dependent Protease La Domain Protein; Lon Protease Domain-Containing Protein; ATP-Dependent Protease; ATP-Dependent Proteinase; ATP-Dependent Protease La Domain-Containing Protein; Protease; ATP-Dependent Endopeptidase Lon
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMARACLRDDAPFGVCLLKSGPEVAQEGEVSVPETIGCMARIVE CDTGEFGMLLLRTIGTQRFELLSHRVEANGLLVGIAEPMQEDIPLEGDSALAQFGACAEALERIVEVLRRSDAELPFAEP FRFDDPTWVSNRLAEVLPLDLRARQKLMEFPDVGARIDAVHRELNRHGWL
Sequences:
>Translated_210_residues MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMARACLRDDAPFGVCLLKSGPEVAQEGEVSVPETIGCMARIVE CDTGEFGMLLLRTIGTQRFELLSHRVEANGLLVGIAEPMQEDIPLEGDSALAQFGACAEALERIVEVLRRSDAELPFAEP FRFDDPTWVSNRLAEVLPLDLRARQKLMEFPDVGARIDAVHRELNRHGWL >Mature_209_residues SSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMARACLRDDAPFGVCLLKSGPEVAQEGEVSVPETIGCMARIVEC DTGEFGMLLLRTIGTQRFELLSHRVEANGLLVGIAEPMQEDIPLEGDSALAQFGACAEALERIVEVLRRSDAELPFAEPF RFDDPTWVSNRLAEVLPLDLRARQKLMEFPDVGARIDAVHRELNRHGWL
Specific function: Unknown
COG id: COG2802
COG function: function code R; Uncharacterized protein, similar to the N-terminal domain of Lon protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23297; Mature: 23166
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMARACLRDDAPFGVCLLKSGPEV CCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH AQEGEVSVPETIGCMARIVECDTGEFGMLLLRTIGTQRFELLSHRVEANGLLVGIAEPMQ HCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCHHH EDIPLEGDSALAQFGACAEALERIVEVLRRSDAELPFAEPFRFDDPTWVSNRLAEVLPLD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC LRARQKLMEFPDVGARIDAVHRELNRHGWL HHHHHHHHHCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SSLSTTLIDLPLFPLHTVLFPGGLLPLKVFEARYLDMARACLRDDAPFGVCLLKSGPEV CCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCH AQEGEVSVPETIGCMARIVECDTGEFGMLLLRTIGTQRFELLSHRVEANGLLVGIAEPMQ HCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEEECCCHHH EDIPLEGDSALAQFGACAEALERIVEVLRRSDAELPFAEPFRFDDPTWVSNRLAEVLPLD HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC LRARQKLMEFPDVGARIDAVHRELNRHGWL HHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA