| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53718131
Identifier: 53718131
GI number: 53718131
Start: 533334
End: 534527
Strand: Reverse
Name: 53718131
Synonym: BPSL0492
Alternate gene names: NA
Gene position: 534527-533334 (Counterclockwise)
Preceding gene: 53718132
Following gene: 53718130
Centisome position: 13.12
GC content: 73.2
Gene sequence:
>1194_bases GTGAGCGCCTCGCCGCTTCGCCCGACACCGCCCGCGCGCGTTGCGCGCACGACGCGCCTCACGCCCCCCACCGCCCGATT GCCGATGATGCCCGATACCGCCCTGCCCGACACGCCCGACACGCCCGCGCGCACGTTCCCCGCCGCCGCCCATGCCGACG CCGCCGATCTGCCGACGCTCGCCGCGCAGCCGGTACGCGAGCGCCTCGCCGCGTTCGGCGCGCCGCCCGCGGCGCTCGAC GCGCTGCTGCGCGCCGGCGCGACGCGCCTGCTCGACAGCGACATGATCATCGCGCAGCCGCGCGCGCATGCCGCCGCGCG CGCCGCCGAGCGCGCGACGACGCCGCTGCGCTACGAGCAATCGGCGCAGACCGAGGCCGTGCTCGAGCAAATCGCGCACG AGGGGCTCGCGCCGCATTTCAAGCCGTTCATGCGCGGCTTCTCGCACGTGATGTCGGCGCTCTTCCTGACGCCGGAACAG GACGCGAAGGTTCAGGCGTATCGCGCGGCGGGCCACCACCTGCGCTTTCTGATGAGCGACGGCGGCGGGCCCGCGCTCGC GGGCTGGCGCTCGACGGTGCGCGTCGAGCACGGCCGCACGCGGCTCGCGATCGACAAGGTATGGGGCATCGAAGCGCATC GCGAAAGCATCGGGCTCGTCGCGGTGCGCGCGCCGGGCGCGTTCATGCCGGCCGCCTATCTCGTGTGGCCCGAGCAGTAC CGCACGCTCGAGCGCGCCGCGTGCGGCGAGCCGTTTCTCGAAGGCGGGCTGCAGCTCGGCAACGTGCGCGGCGAGATCGA GACGACGCCCGAGGACCGCCTGCGCATCGGCGGCCCGAACGTGTTCAACAAGTATCTGACGATCGTGCGTCCGTACTTCG TGCGCGCGCTGATGGCGCACGTCGGCTGGCTCGCGCGCGAGGGCCGGCTCGCGCTCTCGCCCGCGCACGAATCGGTCCGG CGCTTCGTGGCCGACGCCGCGCGCGCGCAGTCGCGCTCGAGCGTATACGGCGCCGACGTCGTGCAGCGCGTGCTCGCGCT CAAGTTCGCCGCGAACGAGCTGCTCGGCGATCTCGTGCGCGGCGGCGCGGTACGCCGCTTCGACGATCAGCGCGACCTGC TCGCGCTGTCGAAGATGGAAGGCAGCGCATACCGCTGCTACTACGAAATCCGGATGGGCACGAAACGCGCCTGA
Upstream 100 bases:
>100_bases AACGGCTGAAGGCGCGCGCGATGTTCGTGAGCGGCGAGCTGCGCGAGATCGCGCTGCCGCCGTCGCGCCGCGCCGATGCC GATCGCGTCGCGCCGTACCC
Downstream 100 bases:
>100_bases TCCGCCGTTCACCGTTGTTCGCCGTTTGTCTTTCCACTCGAAAAAGGAAACCGTCATGAGCACGCCAGCCGCTGAAACGC TGCCCCTTCTCGCCCGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 397; Mature: 396
Protein sequence:
>397_residues MSASPLRPTPPARVARTTRLTPPTARLPMMPDTALPDTPDTPARTFPAAAHADAADLPTLAAQPVRERLAAFGAPPAALD ALLRAGATRLLDSDMIIAQPRAHAAARAAERATTPLRYEQSAQTEAVLEQIAHEGLAPHFKPFMRGFSHVMSALFLTPEQ DAKVQAYRAAGHHLRFLMSDGGGPALAGWRSTVRVEHGRTRLAIDKVWGIEAHRESIGLVAVRAPGAFMPAAYLVWPEQY RTLERAACGEPFLEGGLQLGNVRGEIETTPEDRLRIGGPNVFNKYLTIVRPYFVRALMAHVGWLAREGRLALSPAHESVR RFVADAARAQSRSSVYGADVVQRVLALKFAANELLGDLVRGGAVRRFDDQRDLLALSKMEGSAYRCYYEIRMGTKRA
Sequences:
>Translated_397_residues MSASPLRPTPPARVARTTRLTPPTARLPMMPDTALPDTPDTPARTFPAAAHADAADLPTLAAQPVRERLAAFGAPPAALD ALLRAGATRLLDSDMIIAQPRAHAAARAAERATTPLRYEQSAQTEAVLEQIAHEGLAPHFKPFMRGFSHVMSALFLTPEQ DAKVQAYRAAGHHLRFLMSDGGGPALAGWRSTVRVEHGRTRLAIDKVWGIEAHRESIGLVAVRAPGAFMPAAYLVWPEQY RTLERAACGEPFLEGGLQLGNVRGEIETTPEDRLRIGGPNVFNKYLTIVRPYFVRALMAHVGWLAREGRLALSPAHESVR RFVADAARAQSRSSVYGADVVQRVLALKFAANELLGDLVRGGAVRRFDDQRDLLALSKMEGSAYRCYYEIRMGTKRA >Mature_396_residues SASPLRPTPPARVARTTRLTPPTARLPMMPDTALPDTPDTPARTFPAAAHADAADLPTLAAQPVRERLAAFGAPPAALDA LLRAGATRLLDSDMIIAQPRAHAAARAAERATTPLRYEQSAQTEAVLEQIAHEGLAPHFKPFMRGFSHVMSALFLTPEQD AKVQAYRAAGHHLRFLMSDGGGPALAGWRSTVRVEHGRTRLAIDKVWGIEAHRESIGLVAVRAPGAFMPAAYLVWPEQYR TLERAACGEPFLEGGLQLGNVRGEIETTPEDRLRIGGPNVFNKYLTIVRPYFVRALMAHVGWLAREGRLALSPAHESVRR FVADAARAQSRSSVYGADVVQRVLALKFAANELLGDLVRGGAVRRFDDQRDLLALSKMEGSAYRCYYEIRMGTKRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43330; Mature: 43199
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPLRPTPPARVARTTRLTPPTARLPMMPDTALPDTPDTPARTFPAAAHADAADLPTL CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHH AAQPVRERLAAFGAPPAALDALLRAGATRLLDSDMIIAQPRAHAAARAAERATTPLRYEQ HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCC SAQTEAVLEQIAHEGLAPHFKPFMRGFSHVMSALFLTPEQDAKVQAYRAAGHHLRFLMSD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEC GGGPALAGWRSTVRVEHGRTRLAIDKVWGIEAHRESIGLVAVRAPGAFMPAAYLVWPEQY CCCCCCCCCHHHEEEECCCCEEEHHHHHCCHHHHCCCCEEEEECCCCCCCCEEEECCHHH RTLERAACGEPFLEGGLQLGNVRGEIETTPEDRLRIGGPNVFNKYLTIVRPYFVRALMAH HHHHHHHCCCHHHHCCCEECCCCCCEECCCHHCEEECCCHHHHHHHHHHHHHHHHHHHHH VGWLAREGRLALSPAHESVRRFVADAARAQSRSSVYGADVVQRVLALKFAANELLGDLVR HHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGAVRRFDDQRDLLALSKMEGSAYRCYYEIRMGTKRA CCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCC >Mature Secondary Structure SASPLRPTPPARVARTTRLTPPTARLPMMPDTALPDTPDTPARTFPAAAHADAADLPTL CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHH AAQPVRERLAAFGAPPAALDALLRAGATRLLDSDMIIAQPRAHAAARAAERATTPLRYEQ HHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCC SAQTEAVLEQIAHEGLAPHFKPFMRGFSHVMSALFLTPEQDAKVQAYRAAGHHLRFLMSD CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCEEEEEEEC GGGPALAGWRSTVRVEHGRTRLAIDKVWGIEAHRESIGLVAVRAPGAFMPAAYLVWPEQY CCCCCCCCCHHHEEEECCCCEEEHHHHHCCHHHHCCCCEEEEECCCCCCCCEEEECCHHH RTLERAACGEPFLEGGLQLGNVRGEIETTPEDRLRIGGPNVFNKYLTIVRPYFVRALMAH HHHHHHHCCCHHHHCCCEECCCCCCEECCCHHCEEECCCHHHHHHHHHHHHHHHHHHHHH VGWLAREGRLALSPAHESVRRFVADAARAQSRSSVYGADVVQRVLALKFAANELLGDLVR HHHHHCCCCEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGAVRRFDDQRDLLALSKMEGSAYRCYYEIRMGTKRA CCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA