| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is gntX [H]
Identifier: 53718089
GI number: 53718089
Start: 488744
End: 489472
Strand: Reverse
Name: gntX [H]
Synonym: BPSL0450
Alternate gene names: 53718089
Gene position: 489472-488744 (Counterclockwise)
Preceding gene: 53718098
Following gene: 53718088
Centisome position: 12.01
GC content: 73.66
Gene sequence:
>729_bases ATGGCCGCGCGCGCGGGCATTGTCCTGGCACGTTTTTCCGCTGCTGCGCTGCCGAACCGCTGCGCATTGTGCGGCAATTT GTCACATAGGACGATTTGCGACTGTTGCGACGGCGCTTATTGGAATGAGGCGCGGCTGCGCTGCCCCCGCTGCGCGCTGC CGCTGCCGGGCGCGCGCGGCGCGACGCGCTTTCACTGCGGCGCGTGCGCGAAAGCGCCGCCGCCGTTCGACGCGACGCTC GCGCTCGCCGATTACCGCGCGCCGCTCGACAGCCTCGCGCTCGATCTGAAGTTTCGCGCGCAGCTCGCGCTCGGCCGCGA ATTCGGCGAGCGCCTCGCGCGGCTCGCGACGGACGCGCTCGACGGCGCGCCGCCGCTCGACGTGATCGCGCCCGTGCCGC TCGCGCGGCGCAGGCTCGTCGAGCGCGGCTACAACCAGGCGTGGGCGATCGCGCGACCGATCGCACGCAAGCTGAAGGTG CGCGCCGACGCGGCGCTCGCCGCGCGCGTGGCCGATACCGCGCCGCAATCGCGGCTCGCGTTCGACGCGCGGCGCGCGAA TGTCGCGGCGGCGTTCGCCGTCGCGCGTCCGGTCGCGGGGCTGCACGTCGGCGTCGTCGACGACGTGATGACGTCCGGCG CGACGCTCGACGCGCTCGCGCGCACACTGAAGGAGGCGGGCGCGCGGCGCGTGACGAACTTCGTCGCGCTGCGCACCGCG AAGGATTGA
Upstream 100 bases:
>100_bases CCGAAGTATACTCGCTCGCTTCGCGCCATTCAGTGAAGCGACCCTCCGTAGGAGCCCGGCGATGGCGAATCCGGCCGTAT TGCGATGCGGCATCCGCGCG
Downstream 100 bases:
>100_bases CGGCGCGCCGCATCCGCCGCCGCATTCCCACGCTTTTCACCGATCGAATCGAATCATGTTCAACGTCGTTCTCGTCGAGC CCGAAATTCCGCCGAACACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MAARAGIVLARFSAAALPNRCALCGNLSHRTICDCCDGAYWNEARLRCPRCALPLPGARGATRFHCGACAKAPPPFDATL ALADYRAPLDSLALDLKFRAQLALGREFGERLARLATDALDGAPPLDVIAPVPLARRRLVERGYNQAWAIARPIARKLKV RADAALAARVADTAPQSRLAFDARRANVAAAFAVARPVAGLHVGVVDDVMTSGATLDALARTLKEAGARRVTNFVALRTA KD
Sequences:
>Translated_242_residues MAARAGIVLARFSAAALPNRCALCGNLSHRTICDCCDGAYWNEARLRCPRCALPLPGARGATRFHCGACAKAPPPFDATL ALADYRAPLDSLALDLKFRAQLALGREFGERLARLATDALDGAPPLDVIAPVPLARRRLVERGYNQAWAIARPIARKLKV RADAALAARVADTAPQSRLAFDARRANVAAAFAVARPVAGLHVGVVDDVMTSGATLDALARTLKEAGARRVTNFVALRTA KD >Mature_241_residues AARAGIVLARFSAAALPNRCALCGNLSHRTICDCCDGAYWNEARLRCPRCALPLPGARGATRFHCGACAKAPPPFDATLA LADYRAPLDSLALDLKFRAQLALGREFGERLARLATDALDGAPPLDVIAPVPLARRRLVERGYNQAWAIARPIARKLKVR ADAALAARVADTAPQSRLAFDARRANVAAAFAVARPVAGLHVGVVDDVMTSGATLDALARTLKEAGARRVTNFVALRTAK D
Specific function: Could be involved in gluconate metabolism [H]
COG id: COG1040
COG function: function code R; Predicted amidophosphoribosyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ComF/GntX family [H]
Homologues:
Organism=Escherichia coli, GI87082263, Length=231, Percent_Identity=35.0649350649351, Blast_Score=111, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005222 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: NA
Molecular weight: Translated: 25687; Mature: 25556
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARAGIVLARFSAAALPNRCALCGNLSHRTICDCCDGAYWNEARLRCPRCALPLPGARG CCCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC ATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATDAL CCEEECCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGAPPLDVIAPVPLARRRLVERGYNQAWAIARPIARKLKVRADAALAARVADTAPQSRLA CCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FDARRANVAAAFAVARPVAGLHVGVVDDVMTSGATLDALARTLKEAGARRVTNFVALRTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEC KD CC >Mature Secondary Structure AARAGIVLARFSAAALPNRCALCGNLSHRTICDCCDGAYWNEARLRCPRCALPLPGARG CCCHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHCCCCCCHHHCCCCCCCCCCCCCCC ATRFHCGACAKAPPPFDATLALADYRAPLDSLALDLKFRAQLALGREFGERLARLATDAL CCEEECCCCCCCCCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DGAPPLDVIAPVPLARRRLVERGYNQAWAIARPIARKLKVRADAALAARVADTAPQSRLA CCCCCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH FDARRANVAAAFAVARPVAGLHVGVVDDVMTSGATLDALARTLKEAGARRVTNFVALRTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]