| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is ybeT [C]
Identifier: 53718039
GI number: 53718039
Start: 432591
End: 433478
Strand: Reverse
Name: ybeT [C]
Synonym: BPSL0399
Alternate gene names: 53718039
Gene position: 433478-432591 (Counterclockwise)
Preceding gene: 53718040
Following gene: 53718038
Centisome position: 10.64
GC content: 76.46
Gene sequence:
>888_bases ATGATGAACGCAATCAAGAAGCTGCTCCCGACTCACGCCGCGCCGCCGCCCGACGGCGCGCGCCGCCCGACGCCGCGGCG GCGCCTGCTGCATGCGAGGCTGCCGCCCGTCGGCATGCTCGCCGTCGCGGCGGCGCTCGCCGCGGGCGTCGCCGTGACGG AGCGCATCGAGCGCCCGGCGTCCGGCGCGCCGGCCGTCAGCCGCGCGCAACTCGACGAATGGCGCGCGATGGTCGAACAG GCGAGCGAGCCGAACGCGCTCGGGCGTCTGCGCGCGCTCGCGCAGCGCGGCTCGGCCGACGCGCAGGCCGCGCTCGGCCT CGCGCTCGCCGGTTCGCGCGATCTCGCGCTGCGCGACGAAGGCTGGCGCTGGCTCGAGACGGCCGCGCACGCGACGCCGC CCGAGAATGCACCGACGAGCGCCGGCGAACGCGACGCGCGCCTCGCGCTCGGCAAGGCGTGGCTGCTCGGCGCGGGCGGC GCCGCGCGCGACTACCCGCGCGCGCTCGCGATGCTGCGCCCGCTCGCCGCCGCGGGCGATCCGAACGCCGCTTACTATGT CGGCCTCGTCTACCGCAGCGGCTACGGCACGCCCGCGGATGCGACCGAGGCCGCCCGCTGGTTCGAGCTCGCCGCGCGGC AGGACATTCCGGCCGCGCAGTTCATGCTCGCGAACGCATACCGCGACGGCAGCGGCGTGCGCCGCGACGAAGCGCGCGCG CTCGCGCTGTACCGGCAAGCCGCCGACCATGAGCTTCCGGAAGCGGTGCAGGCGCTCGCGATCGCGTACCGCAACGGCGA GCTCGGGCTGCCGCGCGACGCCGACGCGTTTCATGCGCAGTGGATCGAGGCCGCGCACGCGCTCAAGCATCCGGCGCTCG CGCCGTAA
Upstream 100 bases:
>100_bases ACTTACGAGATCGATCTGACGCAATGACGCAGCGGGCGGCGCGCCGCCGGAATGCCGCCGCGCGCCGCCCGCCCGACGCA CCTGAAACCGATTCGCCCCG
Downstream 100 bases:
>100_bases GCGAGCGCCGGCGGGCGAAGGACGGCCGGCGCGGCCCACGCGCGGAATACCCACCGATGAGCGATCGCACGCAAGGCCGT TCCAGCGCCTCGTGCGACGC
Product: hypothetical protein
Products: NA
Alternate protein names: Sel1 Repeat-Containing Protein; Sel1 Domain Protein Repeat-Containing Protein; Sel1 Repeat Family; TPR Repeat-Containing Protein; Sel1 Domain-Containing Protein Repeat-Containing Protein; Tetratricopeptide Repeat-Like Protein; TPR Repeat-Containing SEL1 Subfamily Protein; TPR Repeat Protein SEL1 Subfamily; TPR Repeat SEL1 Subfamily
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MMNAIKKLLPTHAAPPPDGARRPTPRRRLLHARLPPVGMLAVAAALAAGVAVTERIERPASGAPAVSRAQLDEWRAMVEQ ASEPNALGRLRALAQRGSADAQAALGLALAGSRDLALRDEGWRWLETAAHATPPENAPTSAGERDARLALGKAWLLGAGG AARDYPRALAMLRPLAAAGDPNAAYYVGLVYRSGYGTPADATEAARWFELAARQDIPAAQFMLANAYRDGSGVRRDEARA LALYRQAADHELPEAVQALAIAYRNGELGLPRDADAFHAQWIEAAHALKHPALAP
Sequences:
>Translated_295_residues MMNAIKKLLPTHAAPPPDGARRPTPRRRLLHARLPPVGMLAVAAALAAGVAVTERIERPASGAPAVSRAQLDEWRAMVEQ ASEPNALGRLRALAQRGSADAQAALGLALAGSRDLALRDEGWRWLETAAHATPPENAPTSAGERDARLALGKAWLLGAGG AARDYPRALAMLRPLAAAGDPNAAYYVGLVYRSGYGTPADATEAARWFELAARQDIPAAQFMLANAYRDGSGVRRDEARA LALYRQAADHELPEAVQALAIAYRNGELGLPRDADAFHAQWIEAAHALKHPALAP >Mature_295_residues MMNAIKKLLPTHAAPPPDGARRPTPRRRLLHARLPPVGMLAVAAALAAGVAVTERIERPASGAPAVSRAQLDEWRAMVEQ ASEPNALGRLRALAQRGSADAQAALGLALAGSRDLALRDEGWRWLETAAHATPPENAPTSAGERDARLALGKAWLLGAGG AARDYPRALAMLRPLAAAGDPNAAYYVGLVYRSGYGTPADATEAARWFELAARQDIPAAQFMLANAYRDGSGVRRDEARA LALYRQAADHELPEAVQALAIAYRNGELGLPRDADAFHAQWIEAAHALKHPALAP
Specific function: Unknown
COG id: COG0790
COG function: function code R; FOG: TPR repeat, SEL1 subfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI151301150, Length=185, Percent_Identity=29.7297297297297, Blast_Score=65, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31315; Mature: 31315
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNAIKKLLPTHAAPPPDGARRPTPRRRLLHARLPPVGMLAVAAALAAGVAVTERIERPA CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC SGAPAVSRAQLDEWRAMVEQASEPNALGRLRALAQRGSADAQAALGLALAGSRDLALRDE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCC GWRWLETAAHATPPENAPTSAGERDARLALGKAWLLGAGGAARDYPRALAMLRPLAAAGD CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCC PNAAYYVGLVYRSGYGTPADATEAARWFELAARQDIPAAQFMLANAYRDGSGVRRDEARA CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH LALYRQAADHELPEAVQALAIAYRNGELGLPRDADAFHAQWIEAAHALKHPALAP HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMNAIKKLLPTHAAPPPDGARRPTPRRRLLHARLPPVGMLAVAAALAAGVAVTERIERPA CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCC SGAPAVSRAQLDEWRAMVEQASEPNALGRLRALAQRGSADAQAALGLALAGSRDLALRDE CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEECCC GWRWLETAAHATPPENAPTSAGERDARLALGKAWLLGAGGAARDYPRALAMLRPLAAAGD CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCC PNAAYYVGLVYRSGYGTPADATEAARWFELAARQDIPAAQFMLANAYRDGSGVRRDEARA CCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHH LALYRQAADHELPEAVQALAIAYRNGELGLPRDADAFHAQWIEAAHALKHPALAP HHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA