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The map label for this gene is lrp [C]

Identifier: 53717971

GI number: 53717971

Start: 353024

End: 353512

Strand: Reverse

Name: lrp [C]

Synonym: BPSL0330

Alternate gene names: 53717971

Gene position: 353512-353024 (Counterclockwise)

Preceding gene: 53717973

Following gene: 53717969

Centisome position: 8.68

GC content: 68.3

Gene sequence:

>489_bases
ATGCAAAAACGCCTTTCCACGCCGTTTGCCGCGGCGAACACGCTCGATGCGATCGACCGCGAGCTGCTGCGCACGCTCGC
CGACGACGCGCGCCTGCCCGTCAGCGAACTCGCGCGGCGCGTCGGGCTGTCCGCGCCGAGCACGGCCGACCGGCTGCGCA
GGCTCGAAGCGCAGGGCGTGATCGCGCGCTTCACGGTCGAGCTCGATCCGCGCGCGCTCGGCTACACGCTGCAGGCGATC
GTGCGCGTGAAGCCGCTGCCCGGCCAGTTGCATCTCGTCGAGGAGTTGTTGCGGCGGATTCCGGAGTTCGTCGAATGCGA
CAAGGTGACGGGCGACGACTGCTTCGTCTGCCGGCTCTATCTGCACTCGATCGAACAGCTCGACGGAATACTCGCGAAAG
TGACCGAGCGTGCGGAAACGAGCACCGCGATCGTCAAGTCGACGCCCGTCGCGCGGCGCCTGCCGCCGCTCGCGCGCGAA
GAGGATTGA

Upstream 100 bases:

>100_bases
CAAGAAGAAAGCCTGGCTTCGATTCTAGGGACTTGATTCGCACATCTCCATCGCTAAACTCAGCACAAAACGCCTTTCCT
CCTTTGAAAAGAAGGTCGCC

Downstream 100 bases:

>100_bases
CGCGCGCGGCGCGCCTCGCCGCGCGCGCGCCGCGCGGCCGGGGCGCGGCGCCGCGATAGCCGCCGCGTGCGCGGCGGGGT
GTCACGCCGCCTCGCGCGCC

Product: transcription regulator AsnC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQKRLSTPFAAANTLDAIDRELLRTLADDARLPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPRALGYTLQAI
VRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLHSIEQLDGILAKVTERAETSTAIVKSTPVARRLPPLARE
ED

Sequences:

>Translated_162_residues
MQKRLSTPFAAANTLDAIDRELLRTLADDARLPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPRALGYTLQAI
VRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLHSIEQLDGILAKVTERAETSTAIVKSTPVARRLPPLARE
ED
>Mature_162_residues
MQKRLSTPFAAANTLDAIDRELLRTLADDARLPVSELARRVGLSAPSTADRLRRLEAQGVIARFTVELDPRALGYTLQAI
VRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLYLHSIEQLDGILAKVTERAETSTAIVKSTPVARRLPPLARE
ED

Specific function: Mediates A Global Response To Leucine. Exogenous Leucine Affects The Expression Of A Number Of Different Operons; Lrp Mediates This Effect For At Least Some Of These Operons. For Example It Is Regulator Of The Branched-Chain Amino Acid Transport Genes. [

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=101, Percent_Identity=37.6237623762376, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 18067; Mature: 18067

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKRLSTPFAAANTLDAIDRELLRTLADDARLPVSELARRVGLSAPSTADRLRRLEAQGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCE
IARFTVELDPRALGYTLQAIVRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLY
EEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LHSIEQLDGILAKVTERAETSTAIVKSTPVARRLPPLAREED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MQKRLSTPFAAANTLDAIDRELLRTLADDARLPVSELARRVGLSAPSTADRLRRLEAQGV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCE
IARFTVELDPRALGYTLQAIVRVKPLPGQLHLVEELLRRIPEFVECDKVTGDDCFVCRLY
EEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
LHSIEQLDGILAKVTERAETSTAIVKSTPVARRLPPLAREED
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA