| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is yigA [C]
Identifier: 53717851
GI number: 53717851
Start: 217630
End: 218367
Strand: Reverse
Name: yigA [C]
Synonym: BPSL0209
Alternate gene names: 53717851
Gene position: 218367-217630 (Counterclockwise)
Preceding gene: 53717852
Following gene: 53717850
Centisome position: 5.36
GC content: 71.0
Gene sequence:
>738_bases TTGCCGAAGCCCGAACGAAGCGCCATGAACGATCGCGAAGTCGCCGACTACCTGCTCGCCAACCCCGAATTCTTCGCCCA GCACGCGGAGCTGCTCGCGACCATCAAGCTCGCGAATCCGCACGGCAAGGCCGCGGTATCGCTTCAGGAGCGGCAGATGG AGATGCTGCGCGAGAAGAACAAGCATCTCGAACGCCGGCTCGCCGAACTGCTGCGCTACGGCCACGAGAACGACGGGCTC GCCGCGAAATTCAACCGCTGGACCGCGCGCGTGATCGCCGAGCGCGATCCGTACGCGCTGCCGCGCGCCATCGCGGGCGG CCTCGCCGACGTGTTCGACGTGCCGCAGACGGCGCTCAGGCTCTGGGACGTCGCCGAGACTTACGCGCAAGCCGATTTCG CACGCAACGTCGGCGAGGAGGTGCGCCTCTTCACGAACAGCCTCGCGACCCCATATTGCGGCGCGAACACCGGCTTCGAG GCCGCGCAGTGGCTCACGCCCGTCGCGGCCCCGCCCGCCGCCGACGACGGCGAAGCGCCCGCGGCGAGCGGCGCGGCCGA GTCGGTCGCGCTGATCGCGCTGCGCGCGAGCGCCGAAGGCGAGGGCGCGGGCGCGTTCGGCCTGCTCGTGCTGGGCTCGC CGGACCCGCGGCGCTTCCACGACGGGATGGGCACCGATTTCCTCACGCAGATCGGCACGCTCGCGAGCGCGGCGCTCACG CGCCTGCTGCCGCACTGA
Upstream 100 bases:
>100_bases GCGACGAGCGCGCGCCGCTCATGATGGCCGGCCCCGCGACCACCGTCTTCGAAGGCGTGATCGAGCTGCCCGCCTGACCT TTAATAGCCAGACCTTTCAT
Downstream 100 bases:
>100_bases CGGCCGCGCCTCCGCCCGCCGCCCGCCGACACGCGCCATGACCGCCAAGCCGATCGCCGATCCGATCGTCGACTACCTGT CGAACCTGCGGCACGTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MPKPERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLREKNKHLERRLAELLRYGHENDGL AAKFNRWTARVIAERDPYALPRAIAGGLADVFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFE AAQWLTPVAAPPAADDGEAPAASGAAESVALIALRASAEGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLASAALT RLLPH
Sequences:
>Translated_245_residues MPKPERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLREKNKHLERRLAELLRYGHENDGL AAKFNRWTARVIAERDPYALPRAIAGGLADVFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFE AAQWLTPVAAPPAADDGEAPAASGAAESVALIALRASAEGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLASAALT RLLPH >Mature_244_residues PKPERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLREKNKHLERRLAELLRYGHENDGLA AKFNRWTARVIAERDPYALPRAIAGGLADVFDVPQTALRLWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEA AQWLTPVAAPPAADDGEAPAASGAAESVALIALRASAEGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLASAALTR LLPH
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26430; Mature: 26299
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKPERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLREKN CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH KHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADVFDVPQTALR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH LWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLTPVAAPPAADDGEAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC AASGAAESVALIALRASAEGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLASAALT CCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH RLLPH HHCCC >Mature Secondary Structure PKPERSAMNDREVADYLLANPEFFAQHAELLATIKLANPHGKAAVSLQERQMEMLREKN CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHH KHLERRLAELLRYGHENDGLAAKFNRWTARVIAERDPYALPRAIAGGLADVFDVPQTALR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHH LWDVAETYAQADFARNVGEEVRLFTNSLATPYCGANTGFEAAQWLTPVAAPPAADDGEAP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCC AASGAAESVALIALRASAEGEGAGAFGLLVLGSPDPRRFHDGMGTDFLTQIGTLASAALT CCCCCHHHHEEEEEECCCCCCCCCEEEEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHH RLLPH HHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA