| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53717812
Identifier: 53717812
GI number: 53717812
Start: 173641
End: 174651
Strand: Reverse
Name: 53717812
Synonym: BPSL0170
Alternate gene names: NA
Gene position: 174651-173641 (Counterclockwise)
Preceding gene: 53717813
Following gene: 53717811
Centisome position: 4.29
GC content: 63.11
Gene sequence:
>1011_bases ATGAGGAAGGAAACGCGCCAGGCATATGAAAAGTACACCGCGCAAATCGCCAAGCTGAACGACACGGGCGACGTGTCGAA GAAATTCGCGGTTGAGCCGACCGTGCAACAGCGGCTCGAAACGAAGATGCAGGAATCGAGCGAGTTTCTCAAGCGCATCA ACATCCTGCCCGTACTTGAGCTCGAAGGCGAAAAGCTCGGCCTGTCCGTGTCCGGCCCGATCGCGAGCCGCACCGACACC ACGAAGGCCGCACGCCAACCGATCGACCCGACGGCGCTCGACAGCAACCGCTACCGCTGCGAGAAGACCGACTACGACAC GGCGATTCCGTATCGCAAGCTCGACATGTGGGCGAAGTTCCCGGACTTCCAGCAGCGCATCCGGGACGTGATCCTCAACC AGGGAGCGCTCGACCGCATCATGATCGGCTGGAACGGCGTGAAGGCGGCCGCGACGACCGACCGGCAGGCGAACCCGCTG TTGCAGGACGTGAACATCGGCTGGCTCCAACAGTACCGCGAGCGCGCGGCGCAGCGCGTGCTGCACGAAGGCAAGCAGGC CGGCAAGGTGCTCGTCGGCAAGGCAGGCGATTACGATAACCTCGACGCGCTCGTGATGGATATCGTCTCGTCGATGATCG ACCCGTGGTTTCAGGAAGACACGGGCCTTGTCGCGATCTGCGGCCGCGAGCTGCTGCACGACAAGTATTTCCCGATCGTC AACGCGACGCAGGCGCCGACCGAGCGGCTCGCGGCCGATCTGATCGTGAGCCAGAAGCGCATCGGCAATCTGCCGGCCGT GCGCGTGCCGTTCTTCCCGAAGCGCGCGCTGATGGTCACGAAGCTGTCGAATCTGTCGATCTACTACCAGGAAGGCGCGC GCCGGCGCACGCTGAAGGAAGTGCCGGAACGCGACCGCATCGAGAACTACGAATCGTCGAACGACGCCTACGTGGTCGAA GACTTCGGTTGCGGCTGCGTGGCCGAAAACATCGAACTGGCGGCGGCATGA
Upstream 100 bases:
>100_bases CGACAACGGCGCGCCGCAGCGCCCGCCGTCGACCGGCTCGACGGGCGAGCTCGTGACCGACTGCTGACCCATCCCGCACA CCACACAGGAGAATTTCCCG
Downstream 100 bases:
>100_bases CGATCAACACGCCCGCCCGCGCACACTTCAATCGCGTCTCGGCCGCGCGCGCGGCGGCCGCCGCGTCGCCCGGCGCGACG ATGAAGGGCGCGACCGCCTA
Product: phage major capsid protein
Products: NA
Alternate protein names: Capsid Protein; Phage Capsid Protein P2 Family; Capsid Proteins; Phage Capsid Protein; Phage Capsid Protein; Capsid; Phage Gene; Bacteriophage Capsid Protein; Gp2 Phage Capsid Protein P2 Family Protein; Phage-Related Capsid Protein; Prophage; Phage P2 Capsid GpN-Like Protein; Minor Capsid / Capsid Protein N*; Phage Capsid-Like Protein; Prophage Capsid Protein; Phage-Related Capsid Protein; Bacteriophage Protein; Phage-Related Capsid Completion Protein; Phage Protein; Bacteriophage Capsid Protein N; Capsid-Like Protein; Capsid Protein Phage Origin; Phage Capsid Protein N; Phage Capsid Family
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MRKETRQAYEKYTAQIAKLNDTGDVSKKFAVEPTVQQRLETKMQESSEFLKRINILPVLELEGEKLGLSVSGPIASRTDT TKAARQPIDPTALDSNRYRCEKTDYDTAIPYRKLDMWAKFPDFQQRIRDVILNQGALDRIMIGWNGVKAAATTDRQANPL LQDVNIGWLQQYRERAAQRVLHEGKQAGKVLVGKAGDYDNLDALVMDIVSSMIDPWFQEDTGLVAICGRELLHDKYFPIV NATQAPTERLAADLIVSQKRIGNLPAVRVPFFPKRALMVTKLSNLSIYYQEGARRRTLKEVPERDRIENYESSNDAYVVE DFGCGCVAENIELAAA
Sequences:
>Translated_336_residues MRKETRQAYEKYTAQIAKLNDTGDVSKKFAVEPTVQQRLETKMQESSEFLKRINILPVLELEGEKLGLSVSGPIASRTDT TKAARQPIDPTALDSNRYRCEKTDYDTAIPYRKLDMWAKFPDFQQRIRDVILNQGALDRIMIGWNGVKAAATTDRQANPL LQDVNIGWLQQYRERAAQRVLHEGKQAGKVLVGKAGDYDNLDALVMDIVSSMIDPWFQEDTGLVAICGRELLHDKYFPIV NATQAPTERLAADLIVSQKRIGNLPAVRVPFFPKRALMVTKLSNLSIYYQEGARRRTLKEVPERDRIENYESSNDAYVVE DFGCGCVAENIELAAA >Mature_336_residues MRKETRQAYEKYTAQIAKLNDTGDVSKKFAVEPTVQQRLETKMQESSEFLKRINILPVLELEGEKLGLSVSGPIASRTDT TKAARQPIDPTALDSNRYRCEKTDYDTAIPYRKLDMWAKFPDFQQRIRDVILNQGALDRIMIGWNGVKAAATTDRQANPL LQDVNIGWLQQYRERAAQRVLHEGKQAGKVLVGKAGDYDNLDALVMDIVSSMIDPWFQEDTGLVAICGRELLHDKYFPIV NATQAPTERLAADLIVSQKRIGNLPAVRVPFFPKRALMVTKLSNLSIYYQEGARRRTLKEVPERDRIENYESSNDAYVVE DFGCGCVAENIELAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37974; Mature: 37974
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKETRQAYEKYTAQIAKLNDTGDVSKKFAVEPTVQQRLETKMQESSEFLKRINILPVLE CCCHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEE LEGEKLGLSVSGPIASRTDTTKAARQPIDPTALDSNRYRCEKTDYDTAIPYRKLDMWAKF ECCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC PDFQQRIRDVILNQGALDRIMIGWNGVKAAATTDRQANPLLQDVNIGWLQQYRERAAQRV HHHHHHHHHHHHCCCCHHEEEECCCCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH LHEGKQAGKVLVGKAGDYDNLDALVMDIVSSMIDPWFQEDTGLVAICGRELLHDKYFPIV HHCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHCCCCEEEECCHHHHHHCCCCCC NATQAPTERLAADLIVSQKRIGNLPAVRVPFFPKRALMVTKLSNLSIYYQEGARRRTLKE CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHEEECCCCEEEECCCHHHHHHHH VPERDRIENYESSNDAYVVEDFGCGCVAENIELAAA CCCHHHHHCCCCCCCEEEEECCCCCEECCCCEEECC >Mature Secondary Structure MRKETRQAYEKYTAQIAKLNDTGDVSKKFAVEPTVQQRLETKMQESSEFLKRINILPVLE CCCHHHHHHHHHHHHHHHCCCCCCCCHHEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEE LEGEKLGLSVSGPIASRTDTTKAARQPIDPTALDSNRYRCEKTDYDTAIPYRKLDMWAKF ECCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC PDFQQRIRDVILNQGALDRIMIGWNGVKAAATTDRQANPLLQDVNIGWLQQYRERAAQRV HHHHHHHHHHHHCCCCHHEEEECCCCCEECCCCCCCCCCHHHHCCCHHHHHHHHHHHHHH LHEGKQAGKVLVGKAGDYDNLDALVMDIVSSMIDPWFQEDTGLVAICGRELLHDKYFPIV HHCCHHCCEEEEECCCCCCCHHHHHHHHHHHHHCHHHHCCCCEEEECCHHHHHHCCCCCC NATQAPTERLAADLIVSQKRIGNLPAVRVPFFPKRALMVTKLSNLSIYYQEGARRRTLKE CCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHEEECCCCEEEECCCHHHHHHHH VPERDRIENYESSNDAYVVEDFGCGCVAENIELAAA CCCHHHHHCCCCCCCEEEEECCCCCEECCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA