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The map label for this gene is yraP [C]

Identifier: 52843184

GI number: 52843184

Start: 3382233

End: 3382820

Strand: Reverse

Name: yraP [C]

Synonym: lpg2991

Alternate gene names: 52843184

Gene position: 3382820-3382233 (Counterclockwise)

Preceding gene: 52843185

Following gene: 52843183

Centisome position: 99.56

GC content: 37.59

Gene sequence:

>588_bases
ATGTTTAAACACGGATGTTTTATACTAATAGTCTTTTTTTTAGCCAGCTGCTTGTCAGGCTGTCTGGGGGTTTTATGGAC
TGGGGCAACTCTAGCCTATGACCGGCACAATGTATATAAAAAATTAGATGATTATAATTTAATAAAAGCTCTTAATGATG
TTTTAGCTGTCAACCGGACATTTAAAAACTCAGAGACAGTACTGGATATTGCTGTGTTCAACAGAGATATTTTAATAGCA
GGGCATGTTCCAACCCAGGAGTTGTACGATGAATTACAACTACGTCTAAGCAAAGTTAAAGGATACAGGCGGTTATTCAA
TCGTGTAATTATCAATAAAATGCCATCCAACTCGATCCAGGACAGCTGGATTACCACGAAAATCCGTAGCCAAATTTTTG
CAGACTCTTCAATCGATCCTAACGCTTTCAAGGTGGTTACTTCTGATCGTGTTGTCTATTTGATGGGAGATGTTCAGACA
GAACAAGCTGAAAAAGTGATTAAAATTGCAAGATACACAGGTGGTGTACAGAAAGTAATAAAACTTATGCGGTATTATAC
TTATCAAACCAGTACGAATATGGCCTGA

Upstream 100 bases:

>100_bases
GGAATTGTTTCTGACGAGCAAGCATTGCTAGCTGTTGATGTGGCAAGACGTGTTGCTGGAGTGAGAAAAGTCGTAAAAAT
ATTCCAATATATACGTTAGC

Downstream 100 bases:

>100_bases
TCAGAATCAGGCCAATAGCTGCACGTCCAATCCAGGAAGTGGCTAACCTGGGAGGATAAGTATACTGTATCAATGGAATC
GACCTTTATCCAGTCGTTTT

Product: hemolysin, lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MFKHGCFILIVFFLASCLSGCLGVLWTGATLAYDRHNVYKKLDDYNLIKALNDVLAVNRTFKNSETVLDIAVFNRDILIA
GHVPTQELYDELQLRLSKVKGYRRLFNRVIINKMPSNSIQDSWITTKIRSQIFADSSIDPNAFKVVTSDRVVYLMGDVQT
EQAEKVIKIARYTGGVQKVIKLMRYYTYQTSTNMA

Sequences:

>Translated_195_residues
MFKHGCFILIVFFLASCLSGCLGVLWTGATLAYDRHNVYKKLDDYNLIKALNDVLAVNRTFKNSETVLDIAVFNRDILIA
GHVPTQELYDELQLRLSKVKGYRRLFNRVIINKMPSNSIQDSWITTKIRSQIFADSSIDPNAFKVVTSDRVVYLMGDVQT
EQAEKVIKIARYTGGVQKVIKLMRYYTYQTSTNMA
>Mature_195_residues
MFKHGCFILIVFFLASCLSGCLGVLWTGATLAYDRHNVYKKLDDYNLIKALNDVLAVNRTFKNSETVLDIAVFNRDILIA
GHVPTQELYDELQLRLSKVKGYRRLFNRVIINKMPSNSIQDSWITTKIRSQIFADSSIDPNAFKVVTSDRVVYLMGDVQT
EQAEKVIKIARYTGGVQKVIKLMRYYTYQTSTNMA

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=151, Percent_Identity=28.476821192053, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 22305; Mature: 22305

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKHGCFILIVFFLASCLSGCLGVLWTGATLAYDRHNVYKKLDDYNLIKALNDVLAVNRT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
FKNSETVLDIAVFNRDILIAGHVPTQELYDELQLRLSKVKGYRRLFNRVIINKMPSNSIQ
CCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DSWITTKIRSQIFADSSIDPNAFKVVTSDRVVYLMGDVQTEQAEKVIKIARYTGGVQKVI
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
KLMRYYTYQTSTNMA
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MFKHGCFILIVFFLASCLSGCLGVLWTGATLAYDRHNVYKKLDDYNLIKALNDVLAVNRT
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC
FKNSETVLDIAVFNRDILIAGHVPTQELYDELQLRLSKVKGYRRLFNRVIINKMPSNSIQ
CCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
DSWITTKIRSQIFADSSIDPNAFKVVTSDRVVYLMGDVQTEQAEKVIKIARYTGGVQKVI
HHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHH
KLMRYYTYQTSTNMA
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]