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The map label for this gene is atpH

Identifier: 52843178

GI number: 52843178

Start: 3379158

End: 3379715

Strand: Reverse

Name: atpH

Synonym: lpg2985

Alternate gene names: 52843178

Gene position: 3379715-3379158 (Counterclockwise)

Preceding gene: 52843179

Following gene: 52843177

Centisome position: 99.47

GC content: 37.63

Gene sequence:

>558_bases
TTGAAGAGATTTAAAATGTCTGATAGTACCACTATAGCCAGACCCTATGCAAAAGCGATATTTGAACATGCTTTAGCAGA
AAAAAAACTGAGTGAATGGTCAGAATATCTTACATTACTGGCTCAAGTTGTTTTAACTCCTCAAGCTACTCAGTTTATCG
CTAATCCTGCATCAACAGATGAACAACAAATTGAACTTCTTATTGAGGTATGTGGTTCAAAGTTCAAGAAAAATGATGCA
CTAAATAATTTAATCAAGCTATTAACAACCAATAAAAGATTGATGTTGTTGCCAGAAATTGAAGCTCTTTATGAAGTATA
TAGAGCAGAGCAAGAAAAAATACTGGAGGTTGATGTAGTCAGCTATTCCGAATTGACTCCAGCGCAACAACAGCGTTTGA
GCGAATCCTTAAGTCAAAGATTATCACGTAAGGTTTCTTTAAAAATAAGTATTGATCCCTCCTTGCTTGGCGGAGCGCTA
ATTCGAGCAGGCGATTTAGTTATCGATGGTTCAGTTCGGGGCAAGCTTAATATGCTTGGCACCAGCTTGGCCGCTTAA

Upstream 100 bases:

>100_bases
CTGAGAAAACAAGTTGCAAAGCTGGCTATTACTGGGGCAGAGAAAATTTTAATGCGAGAGGTAGATGCAAAAGCGAATAG
CGAACTGTTAGATAACCTAA

Downstream 100 bases:

>100_bases
TTTAGAGGATAGTTTCCATGTCAGAACAAGTAGCGTTAAATCCTTCTGAAATCAGTGAATTAATCAGAAAGAAAATAGAT
CAATTTAGTGTGGTTTCTGA

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKRFKMSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKFKKNDA
LNNLIKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGAL
IRAGDLVIDGSVRGKLNMLGTSLAA

Sequences:

>Translated_185_residues
MKRFKMSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKFKKNDA
LNNLIKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGAL
IRAGDLVIDGSVRGKLNMLGTSLAA
>Mature_185_residues
MKRFKMSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTDEQQIELLIEVCGSKFKKNDA
LNNLIKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVVSYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGAL
IRAGDLVIDGSVRGKLNMLGTSLAA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Escherichia coli, GI1790173, Length=178, Percent_Identity=39.8876404494382, Blast_Score=130, Evalue=8e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20595; Mature: 20595

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFKMSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
EQQIELLIEVCGSKFKKNDALNNLIKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHEEC
SYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGKLNMLG
CCHHCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHH
TSLAA
HHHCC
>Mature Secondary Structure
MKRFKMSDSTTIARPYAKAIFEHALAEKKLSEWSEYLTLLAQVVLTPQATQFIANPASTD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCC
EQQIELLIEVCGSKFKKNDALNNLIKLLTTNKRLMLLPEIEALYEVYRAEQEKILEVDVV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHEEC
SYSELTPAQQQRLSESLSQRLSRKVSLKISIDPSLLGGALIRAGDLVIDGSVRGKLNMLG
CCHHCCHHHHHHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHCCEEECCCCCCHHHHHH
TSLAA
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA