Click here to switch to the map view.

The map label for this gene is 52843101

Identifier: 52843101

GI number: 52843101

Start: 3289174

End: 3290436

Strand: Direct

Name: 52843101

Synonym: lpg2907

Alternate gene names: NA

Gene position: 3289174-3290436 (Clockwise)

Preceding gene: 52843100

Following gene: 52843103

Centisome position: 96.8

GC content: 36.5

Gene sequence:

>1263_bases
GTGATAACTCCTTTCACCAAATTATGCTCTGTCATCCATTGCGTATCATCAGCGAATAGTGGTGTTGAAAACGCTAAAAC
GATTGCCAAAACGGATGAATTGACTAATATTTTCATAACGCACTCCTTGCATAAATCGATATCCCTTATGCAGTTGAAAA
ATATTGTACATTATAATTATAGGCTATTTTTGTTGTTAAATGATTTTCATGGAGTTACGACGACATGGACAAGAAACAAA
TTGAATAATGTAAAAACATTTCATATAATAAAAATACAAACAAATGGGGTTCTTTGTATGGCCTTTAGTAAATCAGAAAC
AACCGTTGATAAGTTTTCTCTAGACGAATTCCCTGCATTTTCCGCACATGATTTGGAAATGGCCTTTAGTTTAAAGAAAA
AATATCGGGAATCAAAAGAATCAGGTTATCCATTTACCGGTTTTGTCTGTGATTATGAACGCCGTGATAAGCTTTATGAT
TTTATTTATAGCAGTTGTCATTCACCAAAATTATTTGAAAACAATTTCAAGGTACAAATTGCCTATCTGGATAGAGAGAA
ATCCGGTGTGCGCCACTGGTCATTAATTGAACTGCAATATTCCATTGAAAAGGGCAATAATACTTTAAAAATTTTGGTGC
TTGACAGTTTGGGAGCACAATTATCCTATAACACTGCTCAAATATTAGCGAATGAAGTTGGATTCCAGGATTTGCTTGAT
GAAAACGAAGATCTTTCAATAAAAATCTACATCCCGGATGTTAAATTACAGCACTCGCGCGCAGGGTGCGCCACCTTTAC
TATGGATTGCGCCAGCATGTTGTCTACCCAGGATAAATATGAAAATATTTATGATTTTATGGACAAACAAGCCGAGGTAA
GTGACAAGGTAAAAATTGCAAAACTCGATACTGATTTTCCGGTGCATTGTGCCAGCTTACCCCCTCGGATATTACGAGGT
GCACAAAGCCGAGCCATCATCACAGATGATAAAATTCTGAACTCTACCCCATATATTAATTCTAAAGAGGAAACCTTCAA
GCACTCTCTCCTAAAGCACTGTAGTTTTTTTGAAGACCAACCTCAAACACCAGAGAACATAAAGCGCAATGAAAGAATCA
TGAAGAAAGCGATCAAATGGAGAAACACCATAGACTTGAAAATGAAGACAAGCAGTGCAGAAGAATTTGAAAGCACGTGC
GCAATAGATGATCTTGAAGAATATGCCAATAGTTGTCTGTCTTCTAAATCAGTGCGACTATGA

Upstream 100 bases:

>100_bases
AGGTTGTACTTCAACCGATTGAATATTAGCAAGATTCTGTTGCAATTTATCAAGATCGGCTTGAGCAGCATAAACCTGAA
TTTGCGAATCATCTTGAAAA

Downstream 100 bases:

>100_bases
TGAGATTAAATCTTCCGGAACAACTAGCCAAAACGATCGACTGACTTATGGCAATAAGGAATTTTGTGGTGTTTAAAATA
GTAATCTTGATGATAGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MITPFTKLCSVIHCVSSANSGVENAKTIAKTDELTNIFITHSLHKSISLMQLKNIVHYNYRLFLLLNDFHGVTTTWTRNK
LNNVKTFHIIKIQTNGVLCMAFSKSETTVDKFSLDEFPAFSAHDLEMAFSLKKKYRESKESGYPFTGFVCDYERRDKLYD
FIYSSCHSPKLFENNFKVQIAYLDREKSGVRHWSLIELQYSIEKGNNTLKILVLDSLGAQLSYNTAQILANEVGFQDLLD
ENEDLSIKIYIPDVKLQHSRAGCATFTMDCASMLSTQDKYENIYDFMDKQAEVSDKVKIAKLDTDFPVHCASLPPRILRG
AQSRAIITDDKILNSTPYINSKEETFKHSLLKHCSFFEDQPQTPENIKRNERIMKKAIKWRNTIDLKMKTSSAEEFESTC
AIDDLEEYANSCLSSKSVRL

Sequences:

>Translated_420_residues
MITPFTKLCSVIHCVSSANSGVENAKTIAKTDELTNIFITHSLHKSISLMQLKNIVHYNYRLFLLLNDFHGVTTTWTRNK
LNNVKTFHIIKIQTNGVLCMAFSKSETTVDKFSLDEFPAFSAHDLEMAFSLKKKYRESKESGYPFTGFVCDYERRDKLYD
FIYSSCHSPKLFENNFKVQIAYLDREKSGVRHWSLIELQYSIEKGNNTLKILVLDSLGAQLSYNTAQILANEVGFQDLLD
ENEDLSIKIYIPDVKLQHSRAGCATFTMDCASMLSTQDKYENIYDFMDKQAEVSDKVKIAKLDTDFPVHCASLPPRILRG
AQSRAIITDDKILNSTPYINSKEETFKHSLLKHCSFFEDQPQTPENIKRNERIMKKAIKWRNTIDLKMKTSSAEEFESTC
AIDDLEEYANSCLSSKSVRL
>Mature_420_residues
MITPFTKLCSVIHCVSSANSGVENAKTIAKTDELTNIFITHSLHKSISLMQLKNIVHYNYRLFLLLNDFHGVTTTWTRNK
LNNVKTFHIIKIQTNGVLCMAFSKSETTVDKFSLDEFPAFSAHDLEMAFSLKKKYRESKESGYPFTGFVCDYERRDKLYD
FIYSSCHSPKLFENNFKVQIAYLDREKSGVRHWSLIELQYSIEKGNNTLKILVLDSLGAQLSYNTAQILANEVGFQDLLD
ENEDLSIKIYIPDVKLQHSRAGCATFTMDCASMLSTQDKYENIYDFMDKQAEVSDKVKIAKLDTDFPVHCASLPPRILRG
AQSRAIITDDKILNSTPYINSKEETFKHSLLKHCSFFEDQPQTPENIKRNERIMKKAIKWRNTIDLKMKTSSAEEFESTC
AIDDLEEYANSCLSSKSVRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48182; Mature: 48182

Theoretical pI: Translated: 7.31; Mature: 7.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITPFTKLCSVIHCVSSANSGVENAKTIAKTDELTNIFITHSLHKSISLMQLKNIVHYNY
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHCCE
RLFLLLNDFHGVTTTWTRNKLNNVKTFHIIKIQTNGVLCMAFSKSETTVDKFSLDEFPAF
EEEEEEECCCCCEEEEEHHHCCCCEEEEEEEEECCCEEEEEECCCCCCHHHCCCCCCCCC
SAHDLEMAFSLKKKYRESKESGYPFTGFVCDYERRDKLYDFIYSSCHSPKLFENNFKVQI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEECCCCEEEE
AYLDREKSGVRHWSLIELQYSIEKGNNTLKILVLDSLGAQLSYNTAQILANEVGFQDLLD
EEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHC
ENEDLSIKIYIPDVKLQHSRAGCATFTMDCASMLSTQDKYENIYDFMDKQAEVSDKVKIA
CCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
KLDTDFPVHCASLPPRILRGAQSRAIITDDKILNSTPYINSKEETFKHSLLKHCSFFEDQ
EECCCCCEECCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PQTPENIKRNERIMKKAIKWRNTIDLKMKTSSAEEFESTCAIDDLEEYANSCLSSKSVRL
CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITPFTKLCSVIHCVSSANSGVENAKTIAKTDELTNIFITHSLHKSISLMQLKNIVHYNY
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEEEHHHHHHHHHHHHHHHHCCE
RLFLLLNDFHGVTTTWTRNKLNNVKTFHIIKIQTNGVLCMAFSKSETTVDKFSLDEFPAF
EEEEEEECCCCCEEEEEHHHCCCCEEEEEEEEECCCEEEEEECCCCCCHHHCCCCCCCCC
SAHDLEMAFSLKKKYRESKESGYPFTGFVCDYERRDKLYDFIYSSCHSPKLFENNFKVQI
CCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCCEECCCCEEEE
AYLDREKSGVRHWSLIELQYSIEKGNNTLKILVLDSLGAQLSYNTAQILANEVGFQDLLD
EEECCCCCCCCEEEEEEEEEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHCCHHHHHC
ENEDLSIKIYIPDVKLQHSRAGCATFTMDCASMLSTQDKYENIYDFMDKQAEVSDKVKIA
CCCCCEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE
KLDTDFPVHCASLPPRILRGAQSRAIITDDKILNSTPYINSKEETFKHSLLKHCSFFEDQ
EECCCCCEECCCCCHHHHCCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
PQTPENIKRNERIMKKAIKWRNTIDLKMKTSSAEEFESTCAIDDLEEYANSCLSSKSVRL
CCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA