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The map label for this gene is yggA [H]

Identifier: 52843095

GI number: 52843095

Start: 3284036

End: 3284641

Strand: Direct

Name: yggA [H]

Synonym: lpg2901

Alternate gene names: 52843095

Gene position: 3284036-3284641 (Clockwise)

Preceding gene: 52843094

Following gene: 52843096

Centisome position: 96.65

GC content: 38.45

Gene sequence:

>606_bases
ATGTTGATTTATTTTAATGGATTACTCTTGGGATTATCATTGATAATGGCCTTAGGTCCGCAAAATGTTTTTCTTATCAG
GCAAGGTGCGCGAAAAAATCATGCGGCTCTCTCTGCCGTCATTTGCTTTTTCTGCGATGTCATTTTGGTGTGCGGCAGTG
TCGCTGGATTACATCAATTGCTTTTGGCTCATCCAAACTTGCAAATCTGGATGGTATGGCTAGGCTCTGCCTTTTTAATT
TATTATGCAATAAAAAACTTAAAAAGCGCGTTGTCCAAAAACAAACAAACCGTTGTAGAAACACATCAGCCTCATACAAG
AATGCAAATCATTTTATTTGCCCTGGGGTTTAGTCTGCTTAATCCTCACGCCATTATAGATACCCTGGTGATTGTGGGCA
GCGGCAGCAGTCAATATCCTGACCATAAACTGGCTTTTTTAGCAGGGGTAATTTCTGCCAGCATGATTTGGTTCAGTTCA
TTAACGATGACTACTCGTTATTTTTCAAACCTATTAACCCAAAATAAAGTATGGCAAAAAATAGAGTTACTTAGTGGTAT
TTTAATGGCTTATATTGCGATGAAATTAATCACAAGCAGCTTATAG

Upstream 100 bases:

>100_bases
GCATAAAGTCCTGGAGAAAGCATGTGAAATCAATCAACAATAAAACATCTTGCGCAAAATTATGATATAATCGCCTTTTT
TTTACTGTCCTGATGCAATT

Downstream 100 bases:

>100_bases
ATTAAGCCATAGAGAGTTCATGTCAGGGTTTTAGGATAATAGAAAGGGCCAATCAGTGTGTCGCCAATTGACCCAGTGGA
ATGACACATAGCAAGTCCAA

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MLIYFNGLLLGLSLIMALGPQNVFLIRQGARKNHAALSAVICFFCDVILVCGSVAGLHQLLLAHPNLQIWMVWLGSAFLI
YYAIKNLKSALSKNKQTVVETHQPHTRMQIILFALGFSLLNPHAIIDTLVIVGSGSSQYPDHKLAFLAGVISASMIWFSS
LTMTTRYFSNLLTQNKVWQKIELLSGILMAYIAMKLITSSL

Sequences:

>Translated_201_residues
MLIYFNGLLLGLSLIMALGPQNVFLIRQGARKNHAALSAVICFFCDVILVCGSVAGLHQLLLAHPNLQIWMVWLGSAFLI
YYAIKNLKSALSKNKQTVVETHQPHTRMQIILFALGFSLLNPHAIIDTLVIVGSGSSQYPDHKLAFLAGVISASMIWFSS
LTMTTRYFSNLLTQNKVWQKIELLSGILMAYIAMKLITSSL
>Mature_201_residues
MLIYFNGLLLGLSLIMALGPQNVFLIRQGARKNHAALSAVICFFCDVILVCGSVAGLHQLLLAHPNLQIWMVWLGSAFLI
YYAIKNLKSALSKNKQTVVETHQPHTRMQIILFALGFSLLNPHAIIDTLVIVGSGSSQYPDHKLAFLAGVISASMIWFSS
LTMTTRYFSNLLTQNKVWQKIELLSGILMAYIAMKLITSSL

Specific function: Unknown

COG id: COG1279

COG function: function code R; Lysine efflux permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LysE/ArgO transporter (TC 2.A.75) family [H]

Homologues:

Organism=Escherichia coli, GI1789290, Length=199, Percent_Identity=34.6733668341709, Blast_Score=118, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004777
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22266; Mature: 22266

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00028 ZINC_FINGER_C2H2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIYFNGLLLGLSLIMALGPQNVFLIRQGARKNHAALSAVICFFCDVILVCGSVAGLHQL
CEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLAHPNLQIWMVWLGSAFLIYYAIKNLKSALSKNKQTVVETHQPHTRMQIILFALGFSLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
NPHAIIDTLVIVGSGSSQYPDHKLAFLAGVISASMIWFSSLTMTTRYFSNLLTQNKVWQK
CHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELLSGILMAYIAMKLITSSL
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIYFNGLLLGLSLIMALGPQNVFLIRQGARKNHAALSAVICFFCDVILVCGSVAGLHQL
CEEEEHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LLAHPNLQIWMVWLGSAFLIYYAIKNLKSALSKNKQTVVETHQPHTRMQIILFALGFSLL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHH
NPHAIIDTLVIVGSGSSQYPDHKLAFLAGVISASMIWFSSLTMTTRYFSNLLTQNKVWQK
CHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IELLSGILMAYIAMKLITSSL
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]