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The map label for this gene is soj

Identifier: 52843086

GI number: 52843086

Start: 3273353

End: 3274123

Strand: Direct

Name: soj

Synonym: lpg2891

Alternate gene names: 52843086

Gene position: 3273353-3274123 (Clockwise)

Preceding gene: 52843085

Following gene: 52843087

Centisome position: 96.34

GC content: 44.36

Gene sequence:

>771_bases
ATGGCGAAAGTCATAGCCATTGCCAACCAAAAAGGTGGAGTAGGTAAAACAACCACAGCCATCAATTTATCTGCATCTCT
TGCCGCATCCAAACAGCAAGTTTTGCTGATCGATTTAGATCCTCAGGGTAATGCGACGATGGGTAGTGGGGTAGATAAAA
GACAGTTGGTTCACACAACCAATGATGTCTTGTTACGTGATTGCCTGGCTGAGCAGGCATGCCTTGCGACAACTTGCGGA
TATGATTTAATTCCCGGTAACGAAGATTTAACGGTTGCAGAAGTCAGCCTGATGGAGCGCAATCATCGGGAAACTTTCTT
ATTTAAAGCGTTACAACCCATCCAGTCCAATTATGATTTTATTTTAATTGACTGCCCTCCTGCTTTGAATACATTAACCA
TTAACGCCTTTGTTGCTGCTGACTCTGTTTTGATACCCATGCAGTGTGAATACTATGCTTTGGAAGGATTGGCTGCTTTG
TTGTCAACCATTGAGCAAGTGAAATCGACGGTAAATTCGCGTTTGCACATCGAAGGCGTGCTTCGTACCATGTATGATGC
ACGTAACAGATTATGCGCCGAAGTTTCCAAGCAGTTATTAGAGCATTTCCCTGCAAAAGTGTATAGAACCGTTGTGCCAC
GCAATGTAAGACTGGCCGAAGCGCCAAGTCATGGAATGCCTGCCTTGCAATATGATAAATCCTCACCGGGAGCAGCAGCT
TATATGGTTCTCGCTGCCGAAGTGATTAGTAAACAAACTGTAGCCAGTTAA

Upstream 100 bases:

>100_bases
TTCCGATTCATCAAACATACCGAGTTGAGAGGTATGCTGTCCCGGGTATCGAGGGAGAGCGTTGCTGTGTGCTTATTAAC
AACACGAACAAGGAATAATT

Downstream 100 bases:

>100_bases
TTTGGGGTAAGTAATGACAGTAAAACGCAGTAGTTTAGGCCGTAATTTATCTGCTTTATTAAGTCAATCAAGCAGCTCTT
TATTAGCAAATGAGCAACCC

Product: sporulation initiation inhibitor protein Soj

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MAKVIAIANQKGGVGKTTTAINLSASLAASKQQVLLIDLDPQGNATMGSGVDKRQLVHTTNDVLLRDCLAEQACLATTCG
YDLIPGNEDLTVAEVSLMERNHRETFLFKALQPIQSNYDFILIDCPPALNTLTINAFVAADSVLIPMQCEYYALEGLAAL
LSTIEQVKSTVNSRLHIEGVLRTMYDARNRLCAEVSKQLLEHFPAKVYRTVVPRNVRLAEAPSHGMPALQYDKSSPGAAA
YMVLAAEVISKQTVAS

Sequences:

>Translated_256_residues
MAKVIAIANQKGGVGKTTTAINLSASLAASKQQVLLIDLDPQGNATMGSGVDKRQLVHTTNDVLLRDCLAEQACLATTCG
YDLIPGNEDLTVAEVSLMERNHRETFLFKALQPIQSNYDFILIDCPPALNTLTINAFVAADSVLIPMQCEYYALEGLAAL
LSTIEQVKSTVNSRLHIEGVLRTMYDARNRLCAEVSKQLLEHFPAKVYRTVVPRNVRLAEAPSHGMPALQYDKSSPGAAA
YMVLAAEVISKQTVAS
>Mature_255_residues
AKVIAIANQKGGVGKTTTAINLSASLAASKQQVLLIDLDPQGNATMGSGVDKRQLVHTTNDVLLRDCLAEQACLATTCGY
DLIPGNEDLTVAEVSLMERNHRETFLFKALQPIQSNYDFILIDCPPALNTLTINAFVAADSVLIPMQCEYYALEGLAALL
STIEQVKSTVNSRLHIEGVLRTMYDARNRLCAEVSKQLLEHFPAKVYRTVVPRNVRLAEAPSHGMPALQYDKSSPGAAAY
MVLAAEVISKQTVAS

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27705; Mature: 27574

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVIAIANQKGGVGKTTTAINLSASLAASKQQVLLIDLDPQGNATMGSGVDKRQLVHTT
CCEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
NDVLLRDCLAEQACLATTCGYDLIPGNEDLTVAEVSLMERNHRETFLFKALQPIQSNYDF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
ILIDCPPALNTLTINAFVAADSVLIPMQCEYYALEGLAALLSTIEQVKSTVNSRLHIEGV
EEEECCCCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LRTMYDARNRLCAEVSKQLLEHFPAKVYRTVVPRNVRLAEAPSHGMPALQYDKSSPGAAA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCHHH
YMVLAAEVISKQTVAS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AKVIAIANQKGGVGKTTTAINLSASLAASKQQVLLIDLDPQGNATMGSGVDKRQLVHTT
CEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
NDVLLRDCLAEQACLATTCGYDLIPGNEDLTVAEVSLMERNHRETFLFKALQPIQSNYDF
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCE
ILIDCPPALNTLTINAFVAADSVLIPMQCEYYALEGLAALLSTIEQVKSTVNSRLHIEGV
EEEECCCCCCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LRTMYDARNRLCAEVSKQLLEHFPAKVYRTVVPRNVRLAEAPSHGMPALQYDKSSPGAAA
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCCCCCCCEEECCCCCCHHH
YMVLAAEVISKQTVAS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]