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The map label for this gene is 52843052

Identifier: 52843052

GI number: 52843052

Start: 3232612

End: 3233670

Strand: Reverse

Name: 52843052

Synonym: lpg2856

Alternate gene names: NA

Gene position: 3233670-3232612 (Counterclockwise)

Preceding gene: 52843053

Following gene: 52843051

Centisome position: 95.17

GC content: 43.53

Gene sequence:

>1059_bases
ATGGATCAAGCAAAGGGGGAAGCCGTGTTCGAATTAGCTACCCCATGGGCTTTGTCACTTATTCCTGTCCCTTTGTTTCT
CTGGTATTTGTTACCGCGGGCAAAAGTAAAATTACCTGCTGCATTGAAGGTTCCTTTTTTTGAGGCAATGGCAGGTATTG
TTGAACAAGAGAACCGGCTAATCTCGGCTAAAACGCTGCTATTAATTCCTGTTTTAGTTTGGGTATTGCTGGTTATCGCC
CTTTCTGGTCCGCGATGGGTTGGTGAGCCAAAGCCTGTAGCAAGGGAAGGATATAATATCATGATGGTATTGGATCTTTC
AGGCAGCATGGAAATTACGGATATGCTACTGCATGGCCGACCAGTCAGTCGTTTGCTTGTCGTGAAAAGGGCTGCAGAGC
AATTTGTTGAGGACAGAGTCGGAGATAGAATCGGTTTGATTCTGTTTGGTACTCGAGCTTATTTGCAAACACCATTAACC
TATGACAGACATAGCGTACTAATGAGGATAGACGACGCAACAGCTGGTCTTGCAGGTAAAACTACTTCGATTGGTGATGC
AGTAGGTTTAGCCGTCAAAAGGTTACAAGATGTTCCTTCCAAAGGAAGAGTTATTATTTTGCTGACGGACGGAGCAAACA
ACTCAGGTGTATTAGCCCCCTTAAAAGCAGCAGAGTTAGCCAAGCAAGATGGAATCAAAATCTATACTATAGGCTTAGGT
TCGGAGGCAGATCCAAGAGCGTTAACTGGTGATTTTTTTGCCCCCACCCTTTCCGCCGAACTGGATGAAAAGACATTGGA
AAAAATGGCAAAAATGACAGGTGGTCGTTATTTCAGGGCGACAGATCCTGAGTCTTTACAATCCATATACCAAACCATCA
ATCAACTGGAAACCGTGAAGCAAGAACAGGCAACTGTTCGGCCTCAAAAGGAATATTATCCCTGGTTCGTTGCCTTTGCT
TTGTTATTATGCTTTTATTGGTTGATTAGCAAGGCGGATTTATTTGTGTACTTAAGGTCTTTTTTAAAAGTAGAGCGGAG
CTTAAGTCATGATAGCTGA

Upstream 100 bases:

>100_bases
AGGGGATTGATTTTACTCCGGTTAAATCGATGTTATTGGATTCACCCTATAAAACATCAGATGCACTGAATTTAAATCCT
TTATTTACTCGTGCAGAAAA

Downstream 100 bases:

>100_bases
GTTTCATTTTTTAAGGCCATGGTGTTTGTTGATGATAGTGCCTTTGTTTGCGTTGGTGGTAATTTATTGGCGGCAAAAAC
CAAAATTACATGCCTGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MDQAKGEAVFELATPWALSLIPVPLFLWYLLPRAKVKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIA
LSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLT
YDRHSVLMRIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLG
SEADPRALTGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFA
LLLCFYWLISKADLFVYLRSFLKVERSLSHDS

Sequences:

>Translated_352_residues
MDQAKGEAVFELATPWALSLIPVPLFLWYLLPRAKVKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIA
LSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLT
YDRHSVLMRIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLG
SEADPRALTGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFA
LLLCFYWLISKADLFVYLRSFLKVERSLSHDS
>Mature_352_residues
MDQAKGEAVFELATPWALSLIPVPLFLWYLLPRAKVKLPAALKVPFFEAMAGIVEQENRLISAKTLLLIPVLVWVLLVIA
LSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGRPVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLT
YDRHSVLMRIDDATAGLAGKTTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLG
SEADPRALTGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVKQEQATVRPQKEYYPWFVAFA
LLLCFYWLISKADLFVYLRSFLKVERSLSHDS

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 39053; Mature: 39053

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQAKGEAVFELATPWALSLIPVPLFLWYLLPRAKVKLPAALKVPFFEAMAGIVEQENRL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCCC
ISAKTLLLIPVLVWVLLVIALSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCC
PVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLMRIDDATAGLAGK
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCCC
TTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLG
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
SEADPRALTGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVK
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
QEQATVRPQKEYYPWFVAFALLLCFYWLISKADLFVYLRSFLKVERSLSHDS
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDQAKGEAVFELATPWALSLIPVPLFLWYLLPRAKVKLPAALKVPFFEAMAGIVEQENRL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHCCCC
ISAKTLLLIPVLVWVLLVIALSGPRWVGEPKPVAREGYNIMMVLDLSGSMEITDMLLHGR
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEEEEEECCCCCHHHHHHHCCC
PVSRLLVVKRAAEQFVEDRVGDRIGLILFGTRAYLQTPLTYDRHSVLMRIDDATAGLAGK
CHHHHHHHHHHHHHHHHHHCCCEEEEEEEECHHHHHCCCCCCCCEEEEEECCCCCCCCCC
TTSIGDAVGLAVKRLQDVPSKGRVIILLTDGANNSGVLAPLKAAELAKQDGIKIYTIGLG
CCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECC
SEADPRALTGDFFAPTLSAELDEKTLEKMAKMTGGRYFRATDPESLQSIYQTINQLETVK
CCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHH
QEQATVRPQKEYYPWFVAFALLLCFYWLISKADLFVYLRSFLKVERSLSHDS
HHHHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]