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The map label for this gene is 52843045

Identifier: 52843045

GI number: 52843045

Start: 3223904

End: 3225208

Strand: Direct

Name: 52843045

Synonym: lpg2849

Alternate gene names: NA

Gene position: 3223904-3225208 (Clockwise)

Preceding gene: 52843042

Following gene: 52843056

Centisome position: 94.88

GC content: 38.31

Gene sequence:

>1305_bases
ATGACCCAACAAGATCCTGTAGTGATTAAATCCAAGGGAGACCAGGCTTTAGAGAAGGGGGATTTGCCTCTTGCCTTAAC
ACTGTATGATGAAGCATTAGCGATAAACCCACAATTTTCCGGAGCCTATTATCAAAAAGGAACCGTTTTACTTCGCATGG
GTAAAACAATACAAGCAGCAGCCATGTACTGGCAAGCTTATTTATTCAGCGAATTCAAAACTGACATAGGATTAATGACA
GCAAAAACTCTGGCGCATGCTAATTATTCTTTGTCAGCCTGCAAGCTTTTTGAATCATTTAAAATTGAAGAAATGGACGG
TGAAAGCCTCGCCTATTACCTCTATGCTCTAAGGCAACAAGGAAGGGTACAAGAAGCGTATTCCTTGTTCCCTTATGTAA
ACCAATTCAATATCCCCAAAACAAGTTGGGCAAGAGCCATTATTTTGCTTGACCTTAATAAAGTAGAGGAAGCGCGCTTC
TTACTTGAACCACTTGAAAAAACGGATAAAGATGGACACATCACCATTTTACTGCATGCGGTATATCTGGCTTTAAATGA
TAAAAAAGCAGTAAAATCTCTTTTAGACAGAGCAATTCAACGCATACCCAATAATGATTATTTTTGCTGCCAGCGAATTG
CAATAGACATACTCAATGGTTTAAACAAGACACCGATAGAAACGTATCGCGCATTCAAACGCTTTGATCTCATTGATGCA
GCTGATTATCTTCATAAACATGCTGACAAACATTTGCGACATAGTGGAACAACTTATCAAACATTTGATTTATTAGCACC
ACAGGTTCTTTCTGAAGGCTTAATACTGGAATTTGGAGTGCGATTTGGCTATTCCATTTCCCATATTGCCAAACTCTTTC
CCAAACGCAAAATTTTCGGTTTTGACAGTTTTCAAGGGTTACCTGAAGATTGGCACCACGAAAAGGCTGGCTCTTATTCC
ACCTATGGTAAAATTCCCTCCGTAGCAAGTAATGTGACTTTAATCGCTGGATGGTTTAATGAAACTTTGCCAGATTTTAA
AAAAAATAACAGGGAACCCATAGCTTTTATGAATATCGATTGTGATCTCTATTCTTCCACAAAATTGGTGTTCAACGAAT
TAAACCCCCAGATTGCACCAGGTACTATCATAGTATTCGATGAGTACATTGGTAATATCAATTGGCGCCAGGATGAATTT
AAAGCTTTCCAAGAATGGGTAAAAGAAAATAAAGTGGAATATCGTTATCTTACTGCCAGCTTTTATACCAAACAGGTCTC
GGTACAAATTCTTAAGAGAAAGTGA

Upstream 100 bases:

>100_bases
ATTATTTTTTCATGAAATTGATTAATAAGGATTTTTTCAATACAACTACATTCCGAATAAAAGAATACTATGATATAGAG
GTAGGTACTGGAGAAAATAA

Downstream 100 bases:

>100_bases
AAAATAATTGAAAAAATTAATGCAATTTATTGGCATTAAAAAACCACCTTCCTCTTCGTTTTTTTAGACAAAGAGGAAGG
TAATTCAGTGAATACGGGAT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKTIQAAAMYWQAYLFSEFKTDIGLMT
AKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRVQEAYSLFPYVNQFNIPKTSWARAIILLDLNKVEEARF
LLEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
ADYLHKHADKHLRHSGTTYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWHHEKAGSYS
TYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNPQIAPGTIIVFDEYIGNINWRQDEF
KAFQEWVKENKVEYRYLTASFYTKQVSVQILKRK

Sequences:

>Translated_434_residues
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKTIQAAAMYWQAYLFSEFKTDIGLMT
AKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRVQEAYSLFPYVNQFNIPKTSWARAIILLDLNKVEEARF
LLEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
ADYLHKHADKHLRHSGTTYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWHHEKAGSYS
TYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNPQIAPGTIIVFDEYIGNINWRQDEF
KAFQEWVKENKVEYRYLTASFYTKQVSVQILKRK
>Mature_433_residues
TQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKTIQAAAMYWQAYLFSEFKTDIGLMTA
KTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQGRVQEAYSLFPYVNQFNIPKTSWARAIILLDLNKVEEARFL
LEPLEKTDKDGHITILLHAVYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDAA
DYLHKHADKHLRHSGTTYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFGFDSFQGLPEDWHHEKAGSYST
YGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNIDCDLYSSTKLVFNELNPQIAPGTIIVFDEYIGNINWRQDEFK
AFQEWVKENKVEYRYLTASFYTKQVSVQILKRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49874; Mature: 49742

Theoretical pI: Translated: 7.97; Mature: 7.97

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKTIQAA
CCCCCCEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCCCCEEECCEEEEEECCHHHHH
AMYWQAYLFSEFKTDIGLMTAKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GRVQEAYSLFPYVNQFNIPKTSWARAIILLDLNKVEEARFLLEPLEKTDKDGHITILLHA
CCHHHHHHHCCHHHCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEE
VYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ADYLHKHADKHLRHSGTTYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFG
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHCCCCCCCC
FDSFQGLPEDWHHEKAGSYSTYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNID
CHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCHHHHCCCCCEEEEEEC
CDLYSSTKLVFNELNPQIAPGTIIVFDEYIGNINWRQDEFKAFQEWVKENKVEYRYLTAS
CCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHH
FYTKQVSVQILKRK
HHHHHHHHEEEECC
>Mature Secondary Structure 
TQQDPVVIKSKGDQALEKGDLPLALTLYDEALAINPQFSGAYYQKGTVLLRMGKTIQAA
CCCCCEEEECCCCHHHHHCCCCEEEEEECCEEEECCCCCCCEEECCEEEEEECCHHHHH
AMYWQAYLFSEFKTDIGLMTAKTLAHANYSLSACKLFESFKIEEMDGESLAYYLYALRQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GRVQEAYSLFPYVNQFNIPKTSWARAIILLDLNKVEEARFLLEPLEKTDKDGHITILLHA
CCHHHHHHHCCHHHCCCCCCHHHCCEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEE
VYLALNDKKAVKSLLDRAIQRIPNNDYFCCQRIAIDILNGLNKTPIETYRAFKRFDLIDA
HHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
ADYLHKHADKHLRHSGTTYQTFDLLAPQVLSEGLILEFGVRFGYSISHIAKLFPKRKIFG
HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCEEEEHHHCCCCHHHHHHHCCCCCCCC
FDSFQGLPEDWHHEKAGSYSTYGKIPSVASNVTLIAGWFNETLPDFKKNNREPIAFMNID
CHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEECHHHCCCHHHHCCCCCEEEEEEC
CDLYSSTKLVFNELNPQIAPGTIIVFDEYIGNINWRQDEFKAFQEWVKENKVEYRYLTAS
CCCCCCHHHHHHHCCCCCCCCEEEEEEHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEEHH
FYTKQVSVQILKRK
HHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA