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The map label for this gene is 52843003

Identifier: 52843003

GI number: 52843003

Start: 3162980

End: 3164092

Strand: Direct

Name: 52843003

Synonym: lpg2807

Alternate gene names: NA

Gene position: 3162980-3164092 (Clockwise)

Preceding gene: 52842999

Following gene: 52843006

Centisome position: 93.09

GC content: 42.77

Gene sequence:

>1113_bases
ATGATGGTTAAAAAAGCTCTATATTTGGCAGGTGGTGGTGCTCGAGGCGCTTATCAAGCAGGCGTACTCAAAGCTATCGG
TCATATTTTACAAACCAAAACCCTACCTTTTGACTTAGTGAGTGGCGTCAGCGTAGGCAGCGTCAATGCGGCCGTACTTG
CTGAAAATGCCAATGATTTTCCTGCTGCCCTGGAGAAACTCGAGGCTATTTGGGGTGAAATTCATTGTCAACAAATCTAC
AAAGCCAGTAACTACGAATTAAGCAAATCAGTAATGCGTAATTTAAGCACCTTGATTATCAAACAACGTCAATCAGGGCA
TTTGCTTGATACAACACCATTACGGCAATTTCTGGAAGAAAGCATTGATTTCACACGAATTGAACAAAATATACAAGAAG
GATACCTCGATACTTTCGAAGTTTTAAGCGCCTGTTATGAAACACATCAAACCATCTCTTTCTACGCTCATAATCATTCA
GAATTTGAAGATTGGAATTATCCCCGTCATAGCAGTCAACGTGCCGTGATCAACGCCCAGCATATTCTGGCATCAAGCGC
CTTACCATTGTTCTTTCCCCCTGTCAGCCTCAATGGATTCCATTATGGTGATGGAAGCATAGGCTTGGTCGCCCCCCTTC
GCGGTGCTATTCGTTTTCAAGTGGATAGAATTCTCATCTTAGGTACCAGGGAATTGCCCGAATTTACTGATCCAGAGACC
TTGCGTAATGGTGAAATTGCTTTCGCTCATATTCTAGGCAATATGATGAATGGGCTTTTTCTGGATAATCTGGATAGAGA
CATTGAGATGGTCAATCGTATGAATGAAATAGCGACACTCTTATCTATGTGGAAAAAACGACGCTCTCCCTGGAGACCAA
TCTCAACCCTGCATTTACGCCCAAGCCGAGCAATGGCCTCAGTAGCCCAAAGCCATTACACCAGCATGCCAGTATTGCTT
CGATTTTTATTAAATATTATGGGGGCCAGAAGTCATTCCGGTGATCTACTTAGCTTTTTACTCTTTGAAAAAGAATTTAC
TCGGGAATTACTGGAATTAGGATACCAGGACACCATTACTGCAGCGACAGAAGTGAGCGCCTTTTTTAGTTAA

Upstream 100 bases:

>100_bases
ATATCAATTCATAATTAAGAAAAGATGACATCGATAATTCTTTCTTGCTAATTAGCCCAGATTTCAACTATATTTCAAGT
TATAATAAATAAAATAAAAC

Downstream 100 bases:

>100_bases
CCAGAGTTTGGTTGCCAAAGTGCATCTAGTTGTTATGCAAGCTTCCAATTTAAAAAGATCGCAGGTGTTCTAATATTTTT
TGGGTAGAAGGCATAACTTT

Product: patatin family protein

Products: NA

Alternate protein names: Phospholipase Patatin Family; Patatin Family Protein; Alpha-Beta Hydrolase Family Esterase; Patatin Like Phospholipase; Patatin-Like Phospholipase Family; Patatin-Like Phospholipase; Patatin-Like Phospholipase Family Protein; Lipid Acyl Hydrolase; Esterase Of Alpha-Beta Hydrolase Superfamily Protein; Phospholipase Patatin Family Protein; Alpha-Beta Hydrolase Superfamily Protein; Patatin Family Phospholipase

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MMVKKALYLAGGGARGAYQAGVLKAIGHILQTKTLPFDLVSGVSVGSVNAAVLAENANDFPAALEKLEAIWGEIHCQQIY
KASNYELSKSVMRNLSTLIIKQRQSGHLLDTTPLRQFLEESIDFTRIEQNIQEGYLDTFEVLSACYETHQTISFYAHNHS
EFEDWNYPRHSSQRAVINAQHILASSALPLFFPPVSLNGFHYGDGSIGLVAPLRGAIRFQVDRILILGTRELPEFTDPET
LRNGEIAFAHILGNMMNGLFLDNLDRDIEMVNRMNEIATLLSMWKKRRSPWRPISTLHLRPSRAMASVAQSHYTSMPVLL
RFLLNIMGARSHSGDLLSFLLFEKEFTRELLELGYQDTITAATEVSAFFS

Sequences:

>Translated_370_residues
MMVKKALYLAGGGARGAYQAGVLKAIGHILQTKTLPFDLVSGVSVGSVNAAVLAENANDFPAALEKLEAIWGEIHCQQIY
KASNYELSKSVMRNLSTLIIKQRQSGHLLDTTPLRQFLEESIDFTRIEQNIQEGYLDTFEVLSACYETHQTISFYAHNHS
EFEDWNYPRHSSQRAVINAQHILASSALPLFFPPVSLNGFHYGDGSIGLVAPLRGAIRFQVDRILILGTRELPEFTDPET
LRNGEIAFAHILGNMMNGLFLDNLDRDIEMVNRMNEIATLLSMWKKRRSPWRPISTLHLRPSRAMASVAQSHYTSMPVLL
RFLLNIMGARSHSGDLLSFLLFEKEFTRELLELGYQDTITAATEVSAFFS
>Mature_370_residues
MMVKKALYLAGGGARGAYQAGVLKAIGHILQTKTLPFDLVSGVSVGSVNAAVLAENANDFPAALEKLEAIWGEIHCQQIY
KASNYELSKSVMRNLSTLIIKQRQSGHLLDTTPLRQFLEESIDFTRIEQNIQEGYLDTFEVLSACYETHQTISFYAHNHS
EFEDWNYPRHSSQRAVINAQHILASSALPLFFPPVSLNGFHYGDGSIGLVAPLRGAIRFQVDRILILGTRELPEFTDPET
LRNGEIAFAHILGNMMNGLFLDNLDRDIEMVNRMNEIATLLSMWKKRRSPWRPISTLHLRPSRAMASVAQSHYTSMPVLL
RFLLNIMGARSHSGDLLSFLLFEKEFTRELLELGYQDTITAATEVSAFFS

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41551; Mature: 41551

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVKKALYLAGGGARGAYQAGVLKAIGHILQTKTLPFDLVSGVSVGSVNAAVLAENANDF
CCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCH
PAALEKLEAIWGEIHCQQIYKASNYELSKSVMRNLSTLIIKQRQSGHLLDTTPLRQFLEE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SIDFTRIEQNIQEGYLDTFEVLSACYETHQTISFYAHNHSEFEDWNYPRHSSQRAVINAQ
HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH
HILASSALPLFFPPVSLNGFHYGDGSIGLVAPLRGAIRFQVDRILILGTRELPEFTDPET
HHHHHCCCCEEECCCCCCCEEECCCCEEHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCH
LRNGEIAFAHILGNMMNGLFLDNLDRDIEMVNRMNEIATLLSMWKKRRSPWRPISTLHLR
HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PSRAMASVAQSHYTSMPVLLRFLLNIMGARSHSGDLLSFLLFEKEFTRELLELGYQDTIT
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
AATEVSAFFS
HHHHHHHHCC
>Mature Secondary Structure
MMVKKALYLAGGGARGAYQAGVLKAIGHILQTKTLPFDLVSGVSVGSVNAAVLAENANDF
CCCHHEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEECCCCCH
PAALEKLEAIWGEIHCQQIYKASNYELSKSVMRNLSTLIIKQRQSGHLLDTTPLRQFLEE
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
SIDFTRIEQNIQEGYLDTFEVLSACYETHQTISFYAHNHSEFEDWNYPRHSSQRAVINAQ
HCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCHHHHHH
HILASSALPLFFPPVSLNGFHYGDGSIGLVAPLRGAIRFQVDRILILGTRELPEFTDPET
HHHHHCCCCEEECCCCCCCEEECCCCEEHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCH
LRNGEIAFAHILGNMMNGLFLDNLDRDIEMVNRMNEIATLLSMWKKRRSPWRPISTLHLR
HCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
PSRAMASVAQSHYTSMPVLLRFLLNIMGARSHSGDLLSFLLFEKEFTRELLELGYQDTIT
CHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
AATEVSAFFS
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA