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The map label for this gene is virG [H]

Identifier: 52842959

GI number: 52842959

Start: 3110820

End: 3111548

Strand: Direct

Name: virG [H]

Synonym: lpg2760

Alternate gene names: 52842959

Gene position: 3110820-3111548 (Clockwise)

Preceding gene: 52842957

Following gene: 52842964

Centisome position: 91.56

GC content: 37.04

Gene sequence:

>729_bases
TTGATGTCACAACGCCACTATTTGCTATTTATTGATAATGAGCCTGTCAGTGAAGAACTGAAAGATTACTTTGAAAAGTT
TAATCTTGATATTATTCAACAAAAGAAATTGTTTCCTATTCATGTTGAAAAAGGATTACCTACAGCCATTTTAATTAATT
GGTCAATTTTAAGAGCTGAACCAGAAGTAATTGAACAATTTTATAATATGTATCCAGTGCCATTAATTGTTATTAATAAT
AAACCTGATGAAGAATCAAGCGTTGCCATGCTTGAAGCCGGTGCTGATGATTTTATGACCAAACCCATTTATCCCCGTGA
GCTGCATGCGCGAATTGGTGCTATTTCTCGTCGAGTAATGAGAGCGCAACAAAAACTAGACCATGGTAAAGAAGTATTAA
TGTTTGCTAACTGGCGACTTTATCCAGCCTCCCGACAAGTGTTCGGGGAGAATAATGAAGAATTGCAATTAAGCGCCGGT
GAGTATGATTTGCTTCTTACTTTTGTCCAACAACCGCAACGAGTCCTGGATAGAGAATTTTTATTACAAATTACCAAAAA
TACAGACCTGGTTCCTTTTGACCGAAGGATTGATGTCCAAATTAGTCGTTTGCGTCAAAAAATCGAAATAGACAAAAAAA
AGCCAGCTTTAATCAAAACCATTCGCAATGGCGGCTACATGTTCACAGCTCGGGTTGTAACCCTTAAAGAAAGTGACGCC
ACATTATAA

Upstream 100 bases:

>100_bases
TCTAAAAAGCTCTGGCAAGCATAAATATTTAAAAATAATTGCAAGCAACTGATAAACTTGCCAAAATTAAAGCAATATAT
TTTTTGACCTTTGAGGCAAA

Downstream 100 bases:

>100_bases
TTGATTATTATCTGGCTGATTTAAGCAAATTCGTCTTACTTATTGAGCACTTTTTAAAAACCATTAACTGATATTTGCTT
TATTGGCACAATGCCCGCCC

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MMSQRHYLLFIDNEPVSEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRAEPEVIEQFYNMYPVPLIVINN
KPDEESSVAMLEAGADDFMTKPIYPRELHARIGAISRRVMRAQQKLDHGKEVLMFANWRLYPASRQVFGENNEELQLSAG
EYDLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDA
TL

Sequences:

>Translated_242_residues
MMSQRHYLLFIDNEPVSEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRAEPEVIEQFYNMYPVPLIVINN
KPDEESSVAMLEAGADDFMTKPIYPRELHARIGAISRRVMRAQQKLDHGKEVLMFANWRLYPASRQVFGENNEELQLSAG
EYDLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDA
TL
>Mature_242_residues
MMSQRHYLLFIDNEPVSEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRAEPEVIEQFYNMYPVPLIVINN
KPDEESSVAMLEAGADDFMTKPIYPRELHARIGAISRRVMRAQQKLDHGKEVLMFANWRLYPASRQVFGENNEELQLSAG
EYDLLLTFVQQPQRVLDREFLLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDA
TL

Specific function: VirG is required for the positive regulation of at least two vir loci encoded by the Ti plasmid of A.tumefaciens [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=159, Percent_Identity=36.4779874213836, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786599, Length=159, Percent_Identity=35.8490566037736, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI1790863, Length=160, Percent_Identity=32.5, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI2367329, Length=171, Percent_Identity=35.0877192982456, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787229, Length=247, Percent_Identity=28.7449392712551, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1790552, Length=160, Percent_Identity=33.75, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1788394, Length=165, Percent_Identity=30.9090909090909, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790860, Length=166, Percent_Identity=28.9156626506024, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1787375, Length=164, Percent_Identity=29.2682926829268, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1786911, Length=167, Percent_Identity=28.7425149700599, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI145693140, Length=166, Percent_Identity=29.5180722891566, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003174
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 28309; Mature: 28309

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSQRHYLLFIDNEPVSEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRAE
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECC
PEVIEQFYNMYPVPLIVINNKPDEESSVAMLEAGADDFMTKPIYPRELHARIGAISRRVM
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHH
RAQQKLDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGEYDLLLTFVQQPQRVLDREF
HHHHHHCCCCEEEEEECEEEECCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDA
HEEECCCCCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEEEEECCCC
TL
CC
>Mature Secondary Structure
MMSQRHYLLFIDNEPVSEELKDYFEKFNLDIIQQKKLFPIHVEKGLPTAILINWSILRAE
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEEEEEEEECC
PEVIEQFYNMYPVPLIVINNKPDEESSVAMLEAGADDFMTKPIYPRELHARIGAISRRVM
HHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHH
RAQQKLDHGKEVLMFANWRLYPASRQVFGENNEELQLSAGEYDLLLTFVQQPQRVLDREF
HHHHHHCCCCEEEEEECEEEECCCHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHH
LLQITKNTDLVPFDRRIDVQISRLRQKIEIDKKKPALIKTIRNGGYMFTARVVTLKESDA
HEEECCCCCCCCCCCEECHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEEEEEECCCC
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027669 [H]