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The map label for this gene is 52842829

Identifier: 52842829

GI number: 52842829

Start: 2963086

End: 2963898

Strand: Direct

Name: 52842829

Synonym: lpg2623

Alternate gene names: NA

Gene position: 2963086-2963898 (Clockwise)

Preceding gene: 52842827

Following gene: 52842833

Centisome position: 87.21

GC content: 43.17

Gene sequence:

>813_bases
ATGCGTACTCTATTGTCATGTTTCCTGATAACCCTATTGTCTTTTGGTTTAATTATCAATGAGGCCTCTGCTAAACGCTT
TGGAGGCGGGCGCAGCTTCGGGGTTCAACGCTCTCAAAGCAGTCTTTTCTCATCCAATAAAACACACAATACGTCTTCAT
TAACACAAAAAGCTAATAAAAGCAGATGGGGTGGCGTATTAGGCGGCCTCCTGGTTGGAGGACTATTGGCCAGTCTCTTT
ATGGGCAATGGCTTGGCAAATGGGTTAATCACCTGGCTAATCCTTGGTTCAGTCATTTTCTTTATAATCAGCTTCTTACG
CAGGAAAATGAACCCAGGGTTTCAAGCAACTCAATCCGGAGCATTCCGCCAAAACTCTTTTGAACAATTCACGCAAAACT
ACGGAAACCGAAATAGTGGAGGAGCTCATTTTGCCCAACAAGAAACCAGCTTTGACGCGGACAATTTTCTTCGTGATGCC
AAGATAACTTTTATACGTCTACAAGCGGCTTACGACCAAAAAAATCTGCAGGATTTGCAAACATTCACAGTACCGGAAGT
ATTTGCAGAAATTAAAATGCAACTGGACGAACGAGGCGATGCCCCCAACCAAACGGAAGTCATTTCCCTCGATGCAAAAT
TGCTTGATGTGTCCAAACAATCCTTATCCATGATAGCCAGCGTACAATTCACTGGAACAATCAAAGAGAACGGTGAAATA
TCTAACCTGGATGAAATATGGCATTTCCGCCAGTTTGATAACAGAAAAGAGTGGGTCGTAGGGGGTATTCAGCAAGAAGT
ATTTCAGCCATAA

Upstream 100 bases:

>100_bases
GACGAATCAAAAATAACAAATCAGATTCAATTTAAGAAAACAAGCAACTTGACTTGAGTTCATATATAATAAGCCTGATT
CTAAAAAAGAGGATATTAAT

Downstream 100 bases:

>100_bases
ATACTTTTAGGTTTCCTGGAGTAGCAACTGTCTTTAATGACAGTTGCACTAAAAATCAAAGAAAATAACTGAAATCACTC
AACAATATATTGCACCTGGA

Product: transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; Tim44 Domain Protein; Hypothtical Protein; Tim44-Like Domain Protein; Import Inner Membrane Translocase Subunit; Tim44-Like Domain-Containing Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRTLLSCFLITLLSFGLIINEASAKRFGGGRSFGVQRSQSSLFSSNKTHNTSSLTQKANKSRWGGVLGGLLVGGLLASLF
MGNGLANGLITWLILGSVIFFIISFLRRKMNPGFQATQSGAFRQNSFEQFTQNYGNRNSGGAHFAQQETSFDADNFLRDA
KITFIRLQAAYDQKNLQDLQTFTVPEVFAEIKMQLDERGDAPNQTEVISLDAKLLDVSKQSLSMIASVQFTGTIKENGEI
SNLDEIWHFRQFDNRKEWVVGGIQQEVFQP

Sequences:

>Translated_270_residues
MRTLLSCFLITLLSFGLIINEASAKRFGGGRSFGVQRSQSSLFSSNKTHNTSSLTQKANKSRWGGVLGGLLVGGLLASLF
MGNGLANGLITWLILGSVIFFIISFLRRKMNPGFQATQSGAFRQNSFEQFTQNYGNRNSGGAHFAQQETSFDADNFLRDA
KITFIRLQAAYDQKNLQDLQTFTVPEVFAEIKMQLDERGDAPNQTEVISLDAKLLDVSKQSLSMIASVQFTGTIKENGEI
SNLDEIWHFRQFDNRKEWVVGGIQQEVFQP
>Mature_270_residues
MRTLLSCFLITLLSFGLIINEASAKRFGGGRSFGVQRSQSSLFSSNKTHNTSSLTQKANKSRWGGVLGGLLVGGLLASLF
MGNGLANGLITWLILGSVIFFIISFLRRKMNPGFQATQSGAFRQNSFEQFTQNYGNRNSGGAHFAQQETSFDADNFLRDA
KITFIRLQAAYDQKNLQDLQTFTVPEVFAEIKMQLDERGDAPNQTEVISLDAKLLDVSKQSLSMIASVQFTGTIKENGEI
SNLDEIWHFRQFDNRKEWVVGGIQQEVFQP

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30055; Mature: 30055

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTLLSCFLITLLSFGLIINEASAKRFGGGRSFGVQRSQSSLFSSNKTHNTSSLTQKANK
CHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
SRWGGVLGGLLVGGLLASLFMGNGLANGLITWLILGSVIFFIISFLRRKMNPGFQATQSG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
AFRQNSFEQFTQNYGNRNSGGAHFAQQETSFDADNFLRDAKITFIRLQAAYDQKNLQDLQ
CHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHCCEEEEEEEHHHCHHHHHHHH
TFTVPEVFAEIKMQLDERGDAPNQTEVISLDAKLLDVSKQSLSMIASVQFTGTIKENGEI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHEEEEEECCCCCC
SNLDEIWHFRQFDNRKEWVVGGIQQEVFQP
CCHHHHHHHHHHCCCHHHHHCCHHHHHCCC
>Mature Secondary Structure
MRTLLSCFLITLLSFGLIINEASAKRFGGGRSFGVQRSQSSLFSSNKTHNTSSLTQKANK
CHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHH
SRWGGVLGGLLVGGLLASLFMGNGLANGLITWLILGSVIFFIISFLRRKMNPGFQATQSG
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCC
AFRQNSFEQFTQNYGNRNSGGAHFAQQETSFDADNFLRDAKITFIRLQAAYDQKNLQDLQ
CHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCHHHHHHHCCEEEEEEEHHHCHHHHHHHH
TFTVPEVFAEIKMQLDERGDAPNQTEVISLDAKLLDVSKQSLSMIASVQFTGTIKENGEI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHEEEEEECCCCCC
SNLDEIWHFRQFDNRKEWVVGGIQQEVFQP
CCHHHHHHHHHHCCCHHHHHCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA