Click here to switch to the map view.

The map label for this gene is ylbG [H]

Identifier: 52842630

GI number: 52842630

Start: 2733597

End: 2734676

Strand: Direct

Name: ylbG [H]

Synonym: lpg2421

Alternate gene names: 52842630

Gene position: 2733597-2734676 (Clockwise)

Preceding gene: 52842629

Following gene: 52842632

Centisome position: 80.45

GC content: 36.57

Gene sequence:

>1080_bases
TTGATAGAAGTGCGAACTTTAAACAAAACCAAGAGGAAAACTCTCATGATAGATAATACAGTTAAAATCATTAAACATAA
AGTTGGCTTATTAAACCTTGCTGAAGAATTAGGAAATGTTTCTAAAGCATGTAAAGTAATGGGCTTATCCAGAGATACTT
TTTATCGCTATAAGTCGGCGGTTGAATCGGGAGGCATTGATGCTTTATTCGATCAAAACCGAAGAAAACCTAATATCAAA
AATAGAGTAGATGAATCAGTCGAGCTAGCAGTCAAGGAATACGCGATAGCATTTCCAGCACATGGTCAGCAGCGCACGAG
CAACGAGCTTCGTAAACAAAGTATTTTTGTTTCTCCTAGTGGTGTTCGTAGTATTTGGTTGCGGTATGAACTTGCCAATT
TTAAAGACCGTTTAAAAGCATTAGAGGCTAAAGTAGCCTCTGAAGGGATTATATTAACAGAGGCGCAAGTTAGCGCTTTG
GAGAAAAAGAAATTTGATGATGAAGCATGTGGTGAAATTGAAACAGCCCACCCTGGTTACCTCGGCTCTCAAGATACTTT
TTATGTAGGTACGCTTAAAGGAGTCGGTCGTATTTATCAGCAAACCTTTGTTGATACTTACAGCAAAGTAGCTTTTGCCA
AGCTTTATACGACAAAAATACCGATTACCTCAGCAGATATACTCAATGACAAAGTCTTACCATTCTTTGAGCAATACAAC
TTGCCTATACTGCGAATTTTAACTGACAGAGGCACGGAATATTGTGGAAAGGTAGAGCATCATGATTATCAGCTTTATTT
GGCGATTAATAATATCGACCATACGAAGACAAAAGCAAACTCACCTCAAACAAATGGAATTTGTGAGCGTTTCCATAAAA
CGATTTTACAAGAGTTCTATCAAGTAACATTTCGAAAGAAAATTTACGAATCAATCGATGAATTACAAAAAGATCTGGAC
GAATGGATGGATTACTATAATAATCAACGAACTCATCAAGGTAAAATGTGTTGTGGTCGTACTCCAATGCAAACTTTGAT
AGAGGATAAACAAATCTGGATGGAAAAATTTATAAACTAA

Upstream 100 bases:

>100_bases
ATAGTTATCCTACAGAAGTGATGAGATTAAGGTTTTAATCATATGAATTAGTTTCGACTTAATCTGACACAACTACTTGA
AAAAGTGAGAGTTTCCGGTT

Downstream 100 bases:

>100_bases
ATTTGACCTGACAGACACTTCTTGAAAAACCGGTAACTGTCAGATCAAGTTTGAACTACTACAAATCATATCAGCAATTT
TGTCTGCAGCTTGGAGCCTG

Product: transposase (ISSod13)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MIEVRTLNKTKRKTLMIDNTVKIIKHKVGLLNLAEELGNVSKACKVMGLSRDTFYRYKSAVESGGIDALFDQNRRKPNIK
NRVDESVELAVKEYAIAFPAHGQQRTSNELRKQSIFVSPSGVRSIWLRYELANFKDRLKALEAKVASEGIILTEAQVSAL
EKKKFDDEACGEIETAHPGYLGSQDTFYVGTLKGVGRIYQQTFVDTYSKVAFAKLYTTKIPITSADILNDKVLPFFEQYN
LPILRILTDRGTEYCGKVEHHDYQLYLAINNIDHTKTKANSPQTNGICERFHKTILQEFYQVTFRKKIYESIDELQKDLD
EWMDYYNNQRTHQGKMCCGRTPMQTLIEDKQIWMEKFIN

Sequences:

>Translated_359_residues
MIEVRTLNKTKRKTLMIDNTVKIIKHKVGLLNLAEELGNVSKACKVMGLSRDTFYRYKSAVESGGIDALFDQNRRKPNIK
NRVDESVELAVKEYAIAFPAHGQQRTSNELRKQSIFVSPSGVRSIWLRYELANFKDRLKALEAKVASEGIILTEAQVSAL
EKKKFDDEACGEIETAHPGYLGSQDTFYVGTLKGVGRIYQQTFVDTYSKVAFAKLYTTKIPITSADILNDKVLPFFEQYN
LPILRILTDRGTEYCGKVEHHDYQLYLAINNIDHTKTKANSPQTNGICERFHKTILQEFYQVTFRKKIYESIDELQKDLD
EWMDYYNNQRTHQGKMCCGRTPMQTLIEDKQIWMEKFIN
>Mature_359_residues
MIEVRTLNKTKRKTLMIDNTVKIIKHKVGLLNLAEELGNVSKACKVMGLSRDTFYRYKSAVESGGIDALFDQNRRKPNIK
NRVDESVELAVKEYAIAFPAHGQQRTSNELRKQSIFVSPSGVRSIWLRYELANFKDRLKALEAKVASEGIILTEAQVSAL
EKKKFDDEACGEIETAHPGYLGSQDTFYVGTLKGVGRIYQQTFVDTYSKVAFAKLYTTKIPITSADILNDKVLPFFEQYN
LPILRILTDRGTEYCGKVEHHDYQLYLAINNIDHTKTKANSPQTNGICERFHKTILQEFYQVTFRKKIYESIDELQKDLD
EWMDYYNNQRTHQGKMCCGRTPMQTLIEDKQIWMEKFIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41429; Mature: 41429

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVRTLNKTKRKTLMIDNTVKIIKHKVGLLNLAEELGNVSKACKVMGLSRDTFYRYKSA
CEEEEECCCCHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VESGGIDALFDQNRRKPNIKNRVDESVELAVKEYAIAFPAHGQQRTSNELRKQSIFVSPS
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHEECCCC
GVRSIWLRYELANFKDRLKALEAKVASEGIILTEAQVSALEKKKFDDEACGEIETAHPGY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHCCCCCCCCCCC
LGSQDTFYVGTLKGVGRIYQQTFVDTYSKVAFAKLYTTKIPITSADILNDKVLPFFEQYN
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCHHHHCC
LPILRILTDRGTEYCGKVEHHDYQLYLAINNIDHTKTKANSPQTNGICERFHKTILQEFY
CCEEEEEHHCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QVTFRKKIYESIDELQKDLDEWMDYYNNQRTHQGKMCCGRTPMQTLIEDKQIWMEKFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEVRTLNKTKRKTLMIDNTVKIIKHKVGLLNLAEELGNVSKACKVMGLSRDTFYRYKSA
CEEEEECCCCHHCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
VESGGIDALFDQNRRKPNIKNRVDESVELAVKEYAIAFPAHGQQRTSNELRKQSIFVSPS
HHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHEECCCC
GVRSIWLRYELANFKDRLKALEAKVASEGIILTEAQVSALEKKKFDDEACGEIETAHPGY
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCCCHHCCCCCCCCCCC
LGSQDTFYVGTLKGVGRIYQQTFVDTYSKVAFAKLYTTKIPITSADILNDKVLPFFEQYN
CCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHCCCCCCHHHHCC
LPILRILTDRGTEYCGKVEHHDYQLYLAINNIDHTKTKANSPQTNGICERFHKTILQEFY
CCEEEEEHHCCHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
QVTFRKKIYESIDELQKDLDEWMDYYNNQRTHQGKMCCGRTPMQTLIEDKQIWMEKFIN
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]