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The map label for this gene is 52842619

Identifier: 52842619

GI number: 52842619

Start: 2721767

End: 2723764

Strand: Direct

Name: 52842619

Synonym: lpg2410

Alternate gene names: NA

Gene position: 2721767-2723764 (Clockwise)

Preceding gene: 52842618

Following gene: 161723243

Centisome position: 80.1

GC content: 34.78

Gene sequence:

>1998_bases
ATGAAAACAAAGCAAGAAGTTTCTCAGCAGGATAAATTAAAAGATTCAAAATCGTCTACACCACTACAGACAAAAGAACC
ATGGTTCATCTCTGATACCTTAAATATTACTTTTGACTCCTATGATTTTAGTATCTCTGTCACTGAACAAGCCCCCATAC
CCTCTCGTATTGTTTTCAGTGGTGGAGGTTCAAGAATACTGGCACACATAGGTGCCCTAGATGAGTTAACCAGGCATGGA
TTAAAGTTCACTGAATTTTCCGGAAGCTCAGCCGGTGCAATGGTCGCTGCCTTTGCTTATCTTGGTTATAATTGTTCCGA
AATAAAACAAATTATTTCCTGGTTTAATGAAGATAAACTCCTTGATAGCCCACTCATTTTTAATTTCAATAACATAAAAC
AAATATTTAACAAGGGGGGGCTTAGCTCGGCAAAATTAATGCGTCAAGCAGCAAATTACGTTATTTTAAAAAAAGTAATG
GATATTATATCCGATGAAAAATTCAAAACACGATTTGCAAAATTTCAAAATTTTTTAGAAGAAAATATATACAGCTGCCC
CGAGAATATAACATTTCAAACCTTAGCCAGAATAAAAGAAATATGTCCTGAATGTGAATTAGGAGAAAAACTATTTATTA
CTGGAACAAATTTGAGTACCCAAAAACATGAAGTGTTTTCTATTGATACAACACCATCTATGGCACTTGCCGATGCCATT
ATTATTTCCGCAAATTTACCTATTGCCTTTGAGCGTATCTGCTATCAAGGAAACGTATACAGCGATGGAGGAATCAGCAA
TAATTTACCTGCCCATTGTTTTTCAGAAAAAGGGCATAAAACAACCTTTTTGAAACACAAAGATGATGTTGACTTCAGTG
TACTTGCTCTGCAGTTTGATAATGGGCTTGAAGAGAACGCTCTTTATAGCCAGAACCCAATACCTAAATGGTCATGGCTA
AGCAACACATTCTACTCATTGATTACAGGACATCCAAATGTTACTGAAAACTGGCATGAGGATCTTCAAATACTGAGGCG
ACATGCCCATCAAAGTATTTTAATTAAAACGCCAACTATTGCTTTGACCAATCTCACAATTAGTCAAGATACAAAAAAAG
CCCTGGTCGAATCAGGACGAACAGCTGCCAAGACCTATCTGGAACTCCATGAGTTTTATACGGATGATTATGGAAATATC
AGACATAATGAATGCTTGCATGAAAAATTTCAAAAACCCGAAGAGTTATTGGATTATTGTGTCCTACACAGCCACTTTGC
ACTTTTAAAAAAAATAAAGCAAGCCATTTCCTGCTCACAATATTTAGAAAAAGGGTATAAACATTATTTATGTGAGTTGT
GTGACAACTTGCTTCCACCTCAACTGAAATGCCCCAACGAAGGTTCAGGAACAGAACAACCTGAAATCAAGTTAGAAAAA
GATACCATCATTTGCAAAAAGAATAATAATAGTGGGCTGACATTTTCAATGACATTTTTTGGGGTTCCATCCCCTTTAGG
CAAAACATTAAATCAGGATAGCCCAGAATTAAAAATTAAGCTATTTACAGGTTTATATCCTATACTAATTCAAAACTGGC
AAAATTTATGCCCTGTTTCAGGCATTAGTGGTATATTAAATTCTATCCGCATGTCATTCGTTGAAATCAGTTCAACAGAT
ACCTGTATAAAAACATTAATTGATAAACTGAACGAAATTGAAATTGGACATTTTTTGATATTTGTTTTTAAAGCAGCTTT
AAAAAATTACGATAAACATGACTTCATATTACTATTGAAAAACCTGAAGCATCTTCATCATTCTATCGAGTTAATTAGAA
ATAAACCGTTTCATTCTGACGACCGATTTTATGGACAGTGGAGTTTTGAAGGGCATGATCCCAAAAGAATCCTCGAATTC
ATTAAAAGCGATGATATTTCAGGATTAATGACTATTTTAGAAGATAAAAAGGCGCTGCCCAATAATAAACCGAATTAA

Upstream 100 bases:

>100_bases
TAGGGCGAAATCGTTTTAAATACTCGATAGATTGTGATGGCTGTAGCAAAAGAATCGTAAAAAATAACTTAGAATTTGTT
TTATATAAGGGATTATCGGT

Downstream 100 bases:

>100_bases
CAGGTTTAAATCCAAAGCGTCACTGAGTTAACAAATCAACTTGAATTGGTGTTTTTACTATTAATCAAGTGATCTTTCTG
CCTTGTTTTGGAAAATAAAC

Product: patatin-like phospholipase

Products: NA

Alternate protein names: Patatin-Like Phospholipase; Patatin Phospholipase

Number of amino acids: Translated: 665; Mature: 665

Protein sequence:

>665_residues
MKTKQEVSQQDKLKDSKSSTPLQTKEPWFISDTLNITFDSYDFSISVTEQAPIPSRIVFSGGGSRILAHIGALDELTRHG
LKFTEFSGSSAGAMVAAFAYLGYNCSEIKQIISWFNEDKLLDSPLIFNFNNIKQIFNKGGLSSAKLMRQAANYVILKKVM
DIISDEKFKTRFAKFQNFLEENIYSCPENITFQTLARIKEICPECELGEKLFITGTNLSTQKHEVFSIDTTPSMALADAI
IISANLPIAFERICYQGNVYSDGGISNNLPAHCFSEKGHKTTFLKHKDDVDFSVLALQFDNGLEENALYSQNPIPKWSWL
SNTFYSLITGHPNVTENWHEDLQILRRHAHQSILIKTPTIALTNLTISQDTKKALVESGRTAAKTYLELHEFYTDDYGNI
RHNECLHEKFQKPEELLDYCVLHSHFALLKKIKQAISCSQYLEKGYKHYLCELCDNLLPPQLKCPNEGSGTEQPEIKLEK
DTIICKKNNNSGLTFSMTFFGVPSPLGKTLNQDSPELKIKLFTGLYPILIQNWQNLCPVSGISGILNSIRMSFVEISSTD
TCIKTLIDKLNEIEIGHFLIFVFKAALKNYDKHDFILLLKNLKHLHHSIELIRNKPFHSDDRFYGQWSFEGHDPKRILEF
IKSDDISGLMTILEDKKALPNNKPN

Sequences:

>Translated_665_residues
MKTKQEVSQQDKLKDSKSSTPLQTKEPWFISDTLNITFDSYDFSISVTEQAPIPSRIVFSGGGSRILAHIGALDELTRHG
LKFTEFSGSSAGAMVAAFAYLGYNCSEIKQIISWFNEDKLLDSPLIFNFNNIKQIFNKGGLSSAKLMRQAANYVILKKVM
DIISDEKFKTRFAKFQNFLEENIYSCPENITFQTLARIKEICPECELGEKLFITGTNLSTQKHEVFSIDTTPSMALADAI
IISANLPIAFERICYQGNVYSDGGISNNLPAHCFSEKGHKTTFLKHKDDVDFSVLALQFDNGLEENALYSQNPIPKWSWL
SNTFYSLITGHPNVTENWHEDLQILRRHAHQSILIKTPTIALTNLTISQDTKKALVESGRTAAKTYLELHEFYTDDYGNI
RHNECLHEKFQKPEELLDYCVLHSHFALLKKIKQAISCSQYLEKGYKHYLCELCDNLLPPQLKCPNEGSGTEQPEIKLEK
DTIICKKNNNSGLTFSMTFFGVPSPLGKTLNQDSPELKIKLFTGLYPILIQNWQNLCPVSGISGILNSIRMSFVEISSTD
TCIKTLIDKLNEIEIGHFLIFVFKAALKNYDKHDFILLLKNLKHLHHSIELIRNKPFHSDDRFYGQWSFEGHDPKRILEF
IKSDDISGLMTILEDKKALPNNKPN
>Mature_665_residues
MKTKQEVSQQDKLKDSKSSTPLQTKEPWFISDTLNITFDSYDFSISVTEQAPIPSRIVFSGGGSRILAHIGALDELTRHG
LKFTEFSGSSAGAMVAAFAYLGYNCSEIKQIISWFNEDKLLDSPLIFNFNNIKQIFNKGGLSSAKLMRQAANYVILKKVM
DIISDEKFKTRFAKFQNFLEENIYSCPENITFQTLARIKEICPECELGEKLFITGTNLSTQKHEVFSIDTTPSMALADAI
IISANLPIAFERICYQGNVYSDGGISNNLPAHCFSEKGHKTTFLKHKDDVDFSVLALQFDNGLEENALYSQNPIPKWSWL
SNTFYSLITGHPNVTENWHEDLQILRRHAHQSILIKTPTIALTNLTISQDTKKALVESGRTAAKTYLELHEFYTDDYGNI
RHNECLHEKFQKPEELLDYCVLHSHFALLKKIKQAISCSQYLEKGYKHYLCELCDNLLPPQLKCPNEGSGTEQPEIKLEK
DTIICKKNNNSGLTFSMTFFGVPSPLGKTLNQDSPELKIKLFTGLYPILIQNWQNLCPVSGISGILNSIRMSFVEISSTD
TCIKTLIDKLNEIEIGHFLIFVFKAALKNYDKHDFILLLKNLKHLHHSIELIRNKPFHSDDRFYGQWSFEGHDPKRILEF
IKSDDISGLMTILEDKKALPNNKPN

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 75572; Mature: 75572

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKQEVSQQDKLKDSKSSTPLQTKEPWFISDTLNITFDSYDFSISVTEQAPIPSRIVFS
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEECEEEEEEEECCCCCCCEEEEC
GGGSRILAHIGALDELTRHGLKFTEFSGSSAGAMVAAFAYLGYNCSEIKQIISWFNEDKL
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
LDSPLIFNFNNIKQIFNKGGLSSAKLMRQAANYVILKKVMDIISDEKFKTRFAKFQNFLE
CCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ENIYSCPENITFQTLARIKEICPECELGEKLFITGTNLSTQKHEVFSIDTTPSMALADAI
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHE
IISANLPIAFERICYQGNVYSDGGISNNLPAHCFSEKGHKTTFLKHKDDVDFSVLALQFD
EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEC
NGLEENALYSQNPIPKWSWLSNTFYSLITGHPNVTENWHEDLQILRRHAHQSILIKTPTI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCE
ALTNLTISQDTKKALVESGRTAAKTYLELHEFYTDDYGNIRHNECLHEKFQKPEELLDYC
EEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHH
VLHSHFALLKKIKQAISCSQYLEKGYKHYLCELCDNLLPPQLKCPNEGSGTEQPEIKLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC
DTIICKKNNNSGLTFSMTFFGVPSPLGKTLNQDSPELKIKLFTGLYPILIQNWQNLCPVS
CEEEEEECCCCCEEEEEEEECCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCH
GISGILNSIRMSFVEISSTDTCIKTLIDKLNEIEIGHFLIFVFKAALKNYDKHDFILLLK
HHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
NLKHLHHSIELIRNKPFHSDDRFYGQWSFEGHDPKRILEFIKSDDISGLMTILEDKKALP
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
NNKPN
CCCCC
>Mature Secondary Structure
MKTKQEVSQQDKLKDSKSSTPLQTKEPWFISDTLNITFDSYDFSISVTEQAPIPSRIVFS
CCCHHHHHHHHHHCCCCCCCCCCCCCCEEEECEEEEEEECEEEEEEEECCCCCCCEEEEC
GGGSRILAHIGALDELTRHGLKFTEFSGSSAGAMVAAFAYLGYNCSEIKQIISWFNEDKL
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
LDSPLIFNFNNIKQIFNKGGLSSAKLMRQAANYVILKKVMDIISDEKFKTRFAKFQNFLE
CCCCEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ENIYSCPENITFQTLARIKEICPECELGEKLFITGTNLSTQKHEVFSIDTTPSMALADAI
HHHHCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCHHHHHHE
IISANLPIAFERICYQGNVYSDGGISNNLPAHCFSEKGHKTTFLKHKDDVDFSVLALQFD
EEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEC
NGLEENALYSQNPIPKWSWLSNTFYSLITGHPNVTENWHEDLQILRRHAHQSILIKTPTI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCE
ALTNLTISQDTKKALVESGRTAAKTYLELHEFYTDDYGNIRHNECLHEKFQKPEELLDYC
EEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHH
VLHSHFALLKKIKQAISCSQYLEKGYKHYLCELCDNLLPPQLKCPNEGSGTEQPEIKLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEC
DTIICKKNNNSGLTFSMTFFGVPSPLGKTLNQDSPELKIKLFTGLYPILIQNWQNLCPVS
CEEEEEECCCCCEEEEEEEECCCCHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCH
GISGILNSIRMSFVEISSTDTCIKTLIDKLNEIEIGHFLIFVFKAALKNYDKHDFILLLK
HHHHHHHHHHHHHHEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHH
NLKHLHHSIELIRNKPFHSDDRFYGQWSFEGHDPKRILEFIKSDDISGLMTILEDKKALP
HHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCC
NNKPN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA