Click here to switch to the map view.

The map label for this gene is 52842605

Identifier: 52842605

GI number: 52842605

Start: 2706182

End: 2707252

Strand: Reverse

Name: 52842605

Synonym: lpg2396

Alternate gene names: NA

Gene position: 2707252-2706182 (Counterclockwise)

Preceding gene: 52842606

Following gene: 52842602

Centisome position: 79.68

GC content: 43.6

Gene sequence:

>1071_bases
ATGAAAACAGGACGTTTTGATCAAGCCCAAGCTGATGCGTTTGCTGAGCGTCTTTTGTCTGTTCTCAATGATGCTGCACT
AACTTTGATGATATCCATTGGGCATCGTACCGGCTTGTTTGATGTCATGGACAAGCTTGATTTTGCAAGCAGTGAAGTGA
TAGCCGAGGCGGCAGGCTGCAATGAGCGTTATGTCAGGGAATGGCTTAATGCTCTCGTGGTGGGAGGCATTGTGGATTAT
GATGCGCATACAAAAGCCTATCAATTACCCGCTGAACATGCTTCTTTTCTTACGAGAAAATCTTCGCCACAGAACATGGC
AGTGGTAGCGCAGTTTATTCCAGTTTTGGCCTATGTGGAAAATGGCATAGTGGATGCTTTTAAACACGGAGGCGGTGTTC
CTTATGAGGCTTATCATCGTTTTCATGAAGTCATGGCAGAAGAGAGTGGACAAACGATTTTATCTTCCTTGACTGACAAA
ATTTTACCTATGGTTCACGGCTTGGTTGACAAACTGAACCAGGGAATTCAGGTGCTCGATATTGGTTGTGGTTATGGGCG
TGCCTTGATATTAATGGCTAAAACCTATCCTCAAAGCCAATTTACCGGTTATGATCTGTGTGATGAAACCATTGCTCATG
CTGTACACTCAGCCAAGAAAAATAAAATACAAAATATCCATTTTGAAAAAATGGATTTGTCGGTCTGGGATGAGCAGGAG
AAATATGATCTTATTACCAGCTTTGACGTGATTCATGACCAGGCTAAGCCAGCGCAGGTACTGAGCAACGTATTCAAGGC
ATTGAAGCCTCATGGTATTTTCCTGATGCAGGATATCAAAACCTCCAGTGATGTGGCAGGGAATGTTCATCATCCGCTGG
GGGCGCTTATTTACACTATCTCCTGTATGCATTGTATGACTGTATCCCTCTCACAAAATGGCTTAGGTCTTGGCGCGGCC
TGGGGAGAGGAGCTTGCAGAAAAAATGCTGGTTGAGGCTGGTTTTGGAAAAATTGAAAAGCATTATCTGGAACATGACAT
TATGAATACCTACTATGTGATGCGTAAATAA

Upstream 100 bases:

>100_bases
CTCTGGATATCGACTGCTTCTTTTATAATCCTTATCTATTACGTTAGATACATTATTTTCTCTATGGGATTTTGAAGATT
ACCTTTTTGGGGATCGCAAG

Downstream 100 bases:

>100_bases
AATAAACAGATTATGTAAGAAATCTAATGAGGTTAGGGGCTTTTCTTTTAGGTAACATTTACTCTTGTCAGAGGATAAAC
CAATTAACGGTTATCCGTTA

Product: transcriptional regulator

Products: NA

Alternate protein names: Methyltransferase; Transcriptional Regulator; Transcriptional Regulatory Protein; SAM-Dependent Methyltransferase; Methyltransferase Domain Family; S-Adenosylmethionine-Dependent Methyltransferase; Methyltransferase Protein

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MKTGRFDQAQADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGCNERYVREWLNALVVGGIVDY
DAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGIVDAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDK
ILPMVHGLVDKLNQGIQVLDIGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQE
KYDLITSFDVIHDQAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTISCMHCMTVSLSQNGLGLGAA
WGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK

Sequences:

>Translated_356_residues
MKTGRFDQAQADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGCNERYVREWLNALVVGGIVDY
DAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGIVDAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDK
ILPMVHGLVDKLNQGIQVLDIGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQE
KYDLITSFDVIHDQAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTISCMHCMTVSLSQNGLGLGAA
WGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK
>Mature_356_residues
MKTGRFDQAQADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGCNERYVREWLNALVVGGIVDY
DAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVENGIVDAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDK
ILPMVHGLVDKLNQGIQVLDIGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQE
KYDLITSFDVIHDQAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTISCMHCMTVSLSQNGLGLGAA
WGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17562972, Length=364, Percent_Identity=29.9450549450549, Blast_Score=160, Evalue=8e-40,
Organism=Caenorhabditis elegans, GI17562552, Length=368, Percent_Identity=30.1630434782609, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17562982, Length=356, Percent_Identity=29.4943820224719, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI193208453, Length=236, Percent_Identity=28.8135593220339, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39483; Mature: 39483

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGRFDQAQADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHHHHCCC
NERYVREWLNALVVGGIVDYDAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVE
CHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NGIVDAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQE
ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCH
KYDLITSFDVIHDQAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
SCMHCMTVSLSQNGLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK
HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MKTGRFDQAQADAFAERLLSVLNDAALTLMISIGHRTGLFDVMDKLDFASSEVIAEAAGC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHCCHHHHHHHHHCCC
NERYVREWLNALVVGGIVDYDAHTKAYQLPAEHASFLTRKSSPQNMAVVAQFIPVLAYVE
CHHHHHHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
NGIVDAFKHGGGVPYEAYHRFHEVMAEESGQTILSSLTDKILPMVHGLVDKLNQGIQVLD
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
IGCGYGRALILMAKTYPQSQFTGYDLCDETIAHAVHSAKKNKIQNIHFEKMDLSVWDEQE
ECCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCH
KYDLITSFDVIHDQAKPAQVLSNVFKALKPHGIFLMQDIKTSSDVAGNVHHPLGALIYTI
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
SCMHCMTVSLSQNGLGLGAAWGEELAEKMLVEAGFGKIEKHYLEHDIMNTYYVMRK
HHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA