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The map label for this gene is 52842582

Identifier: 52842582

GI number: 52842582

Start: 2679203

End: 2679874

Strand: Reverse

Name: 52842582

Synonym: lpg2373

Alternate gene names: NA

Gene position: 2679874-2679203 (Counterclockwise)

Preceding gene: 52842583

Following gene: 52842576

Centisome position: 78.87

GC content: 36.16

Gene sequence:

>672_bases
TTGCCTATGTCTGATTTTGTCTATGTGTTAATGGAACGCAGAAGCCGAAATAAAACCAGTGAATTTGTATTCCAGGCTGA
AAGTAAAACCGGCTATATCTATGAACCTAAAAAAGAGGTGAATAGGGCGGTGGAGTCGTCTGGCGTAACATATACCTTGC
GGTTTCATATGATGGATGTTTTTTTCGTACTGGTATTTTTGTTCAGCTTGTTATCTAGTAATGCATATAGCGAAAAAGTG
CATAGTATTTCTCTATTAACTTATCCTGTTGAAGCAATATACGTCATCAATAATCCAAGAACCGGTGAAATGGTCATTGG
CTCAGATTATCATGGGGCTTGCAACTTATGTGGAATCGATTCCCCAGGGGTAGAATTAGCGTATAAAGCTCCCAGGAATG
TTCTAAACGATGGAACTGATTATTCAAATGGGGCATGTTTTGGGGATGGGGTTGATTTGAAGGTAAATGGAGAAAATGCT
TATAGATATAAAGCAAGATTTAAGCTTGCTAATAAAAATCATAATGTTCTTTCTGTAATTGAACCACCACCATTACAAAG
AAGAGGAAAAAATAATAAGTATTTTGAATATACTTATATTTCAACATCTGGCATCAATAAAACTATATTTTGGAAGTACA
CTAAAGAGGCGCTTGAAGCAGGAGAAACGTAA

Upstream 100 bases:

>100_bases
TTATATACATCAATTGTTTAAAGATTTTATATTGCAATCTGATTTAAACAAAATGATTTCAAATTAGGCGCGAATAGACC
CAAAAATCAAGAAATACATC

Downstream 100 bases:

>100_bases
TGTATTTAAGGGAAAAATTTGTTGTAATTTTAATTTGTATATTCATAAGCTCTATTGTATTGGCTATGCCCCAGTAGAAT
TTTTACAATCATGTAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Integrase

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MPMSDFVYVLMERRSRNKTSEFVFQAESKTGYIYEPKKEVNRAVESSGVTYTLRFHMMDVFFVLVFLFSLLSSNAYSEKV
HSISLLTYPVEAIYVINNPRTGEMVIGSDYHGACNLCGIDSPGVELAYKAPRNVLNDGTDYSNGACFGDGVDLKVNGENA
YRYKARFKLANKNHNVLSVIEPPPLQRRGKNNKYFEYTYISTSGINKTIFWKYTKEALEAGET

Sequences:

>Translated_223_residues
MPMSDFVYVLMERRSRNKTSEFVFQAESKTGYIYEPKKEVNRAVESSGVTYTLRFHMMDVFFVLVFLFSLLSSNAYSEKV
HSISLLTYPVEAIYVINNPRTGEMVIGSDYHGACNLCGIDSPGVELAYKAPRNVLNDGTDYSNGACFGDGVDLKVNGENA
YRYKARFKLANKNHNVLSVIEPPPLQRRGKNNKYFEYTYISTSGINKTIFWKYTKEALEAGET
>Mature_222_residues
PMSDFVYVLMERRSRNKTSEFVFQAESKTGYIYEPKKEVNRAVESSGVTYTLRFHMMDVFFVLVFLFSLLSSNAYSEKVH
SISLLTYPVEAIYVINNPRTGEMVIGSDYHGACNLCGIDSPGVELAYKAPRNVLNDGTDYSNGACFGDGVDLKVNGENAY
RYKARFKLANKNHNVLSVIEPPPLQRRGKNNKYFEYTYISTSGINKTIFWKYTKEALEAGET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25310; Mature: 25179

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSDFVYVLMERRSRNKTSEFVFQAESKTGYIYEPKKEVNRAVESSGVTYTLRFHMMDV
CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHCCCEEEEHHHHHHH
FFVLVFLFSLLSSNAYSEKVHSISLLTYPVEAIYVINNPRTGEMVIGSDYHGACNLCGID
HHHHHHHHHHHCCCCCHHHHHEEEEEEECEEEEEEEECCCCCCEEEECCCCCCEEECCCC
SPGVELAYKAPRNVLNDGTDYSNGACFGDGVDLKVNGENAYRYKARFKLANKNHNVLSVI
CCCCEEEECCCHHHHCCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEEECCCCCEEEEE
EPPPLQRRGKNNKYFEYTYISTSGINKTIFWKYTKEALEAGET
CCCCHHHCCCCCCEEEEEEEEECCCCEEEEEEEHHHHHHCCCC
>Mature Secondary Structure 
PMSDFVYVLMERRSRNKTSEFVFQAESKTGYIYEPKKEVNRAVESSGVTYTLRFHMMDV
CHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCHHHHHHHHHHCCCEEEEHHHHHHH
FFVLVFLFSLLSSNAYSEKVHSISLLTYPVEAIYVINNPRTGEMVIGSDYHGACNLCGID
HHHHHHHHHHHCCCCCHHHHHEEEEEEECEEEEEEEECCCCCCEEEECCCCCCEEECCCC
SPGVELAYKAPRNVLNDGTDYSNGACFGDGVDLKVNGENAYRYKARFKLANKNHNVLSVI
CCCCEEEECCCHHHHCCCCCCCCCCEECCCEEEEECCCCEEEEEEEEEEECCCCCEEEEE
EPPPLQRRGKNNKYFEYTYISTSGINKTIFWKYTKEALEAGET
CCCCHHHCCCCCCEEEEEEEEECCCCEEEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA