| Definition | Legionella pneumophila subsp. pneumophila str. Philadelphia 1 chromosome, complete genome. |
|---|---|
| Accession | NC_002942 |
| Length | 3,397,754 |
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The map label for this gene is dnaG [H]
Identifier: 52842570
GI number: 52842570
Start: 2664144
End: 2665889
Strand: Direct
Name: dnaG [H]
Synonym: lpg2360
Alternate gene names: 52842570
Gene position: 2664144-2665889 (Clockwise)
Preceding gene: 52842569
Following gene: 52842571
Centisome position: 78.41
GC content: 39.0
Gene sequence:
>1746_bases CTGAGTTCCAATATGTCTGGCTTAATCCCACAGCCATTCATTGATGATCTATTAAACCGCACTGATTTGGTGGAATTAAT AGACGGATATGTTCCTTTGAAAAAAAGAGGCAACAGTCATATTGCATGTTGCCCTTTCCATAATGAGAAAACACCATCAT TCAATGTCGTTGCAAAAAAACAATTTTATCATTGTTTTGGTTGTGGCGCTTCAGGTAACGCCATCAGTTTTGTAATGAAT TATCTGAATCAAGGTTTTACAGATGCTGTTGAAACCCTCGCGACACGCTTGGGTTTAAGTGTCCCACGGGATGGTACAGG AGAGAAACATAAATCATCTCTCAATCTCTATAATCTCATGTCAGAAGTCAGCCAATATTACCAAAAAAAATTAAAATATA ATGGACAAGTGGCAATTGACTACCTTCGCAACCGAGGTCTTAGTGGGGAAATTGCCAAACGATATCATTTAGGCTATGCA CCTGAAGGTTGGCATAACCTGGAAAAAGCTTTCCCAAACAATCAGCGTGAACTATTGAGTACCGGTATGCTCATTAAAAG CGATGAAGGTAAAATTTATGATAGATATCGTAATCGAATTATGTTCCCCATCCATGACAGAAACGGTCGTGTGATTGGTT TTGGTGGACGTGTACTCGATAAAGATCAAAAACCCAAATACCTTAACTCGCCTGAAACAGTACTTTTTCAAAAAAGTCGT GAGTTATATGGCTTACATCAAGTTCTATCTCAGCAGAAAAATCCCGACAGTATTATTGTTGTTGAAGGTTACATGGATGT CATTGCCTTGGCACAACATGGCATTTTTAATGTGGTAGCAACATTGGGAACTGCCACCAGCACATTCCATATACAACTAT TGGCAAAGCATACCAAACATCTCATTTTTTGCTTTGATGGTGATGCAGCGGGTAAACAAGCAGCCTGGCGAGCATTGGAG AGCAGTTTACCGCATTTGAATGCCGGATTAGATGCCGGATTTATTTTCTTGCCGAATGAACATGACCCGGATAGCCTGGT AAGAAATGAAGGAAAAAACGGTTTCCTCGAGCTCTTGCAACAAGCAACACCACTCCACCGCTTTTTCTTTGATACGTTAA GTAAAGACATTAATTTGTCAAACCCTGCAGGAAAAACACAGCTTATCAACGCAGTGAAACCCTATTTGCAAAAAATGGTT GAGGGCTCATACAAACAGTTGCTTATTGATGACCTGTCACGCTTAACCCATATTGAAAGCCATCGGTTAACTAATTTGAT TACTGATAAATCGGAAAGCAAGCCGGAAGTACAAGCTGCTATTTCTCGTTCACCACTGCGTATTGCTATCGCGCTCCTCT TACAAAACCCCGAAATTTATTCTATAGCAATACAACAAATCAATCCTGCTTTGCTCCATGAACAGGAGCATCATATTTTA TTGAAATTATTGCAACAATTAAAAGACAAGCCCAATGCCAATACTGCCACCCTCATTGAATTCTGGCGCAATAGCAGTTA TTTTGAATTGATAGTTAAATTGGCAGCCTGGGATCATCAAGTGCCTGAGCAGGAGCTGACTAAAGAATTTATTGATGTCT TATTATTTTTACAAAAACAAAATCGTGAGATATTGATACGACAATACATAGAAAAATCCAGAAAAACTGGCTTAACAGAA GCTGAACGGCTCAGTTTACAAAATTTATTAAAGGAAAGACATGGGCAAGCTGAAATTGAAAAATAA
Upstream 100 bases:
>100_bases AAATGTCTGATATGGGTAAAGTCATGGCTATCCTTAAGCCAAAATTACAAGGACGCGCGGACATGGCCCAAGTCAGCGCC CGGATAAAGGCGAAATTAAG
Downstream 100 bases:
>100_bases AAATACTGAAATACTGGTATGTTGCAGCTACCCAGTTTATAATTTAAAACTTTTTGTAATTTCCCATTGTTCCAACAGAA GTGCCTATGACCATGAATGA
Product: DNA primase DnaG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 581; Mature: 580
Protein sequence:
>581_residues MSSNMSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMN YLNQGFTDAVETLATRLGLSVPRDGTGEKHKSSLNLYNLMSEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYA PEGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSR ELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALE SSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMV EGSYKQLLIDDLSRLTHIESHRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHIL LKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTE AERLSLQNLLKERHGQAEIEK
Sequences:
>Translated_581_residues MSSNMSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMN YLNQGFTDAVETLATRLGLSVPRDGTGEKHKSSLNLYNLMSEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYA PEGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSR ELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALE SSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMV EGSYKQLLIDDLSRLTHIESHRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHIL LKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTE AERLSLQNLLKERHGQAEIEK >Mature_580_residues SSNMSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKKQFYHCFGCGASGNAISFVMNY LNQGFTDAVETLATRLGLSVPRDGTGEKHKSSLNLYNLMSEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAP EGWHNLEKAFPNNQRELLSTGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSRE LYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKHLIFCFDGDAAGKQAAWRALES SLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQQATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVE GSYKQLLIDDLSRLTHIESHRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHILL KLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQNREILIRQYIEKSRKTGLTEA ERLSLQNLLKERHGQAEIEK
Specific function: DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments on both template strands at replication forks during chromosomal DNA synthesis [H]
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain [H]
Homologues:
Organism=Escherichia coli, GI1789447, Length=586, Percent_Identity=43.1740614334471, Blast_Score=464, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016136 - InterPro: IPR013264 - InterPro: IPR019475 - InterPro: IPR006295 - InterPro: IPR013173 - InterPro: IPR006171 - InterPro: IPR002694 [H]
Pfam domain/function: PF10410 DnaB_bind; PF08278 DnaG_DnaB_bind; PF01751 Toprim; PF08275 Toprim_N; PF01807 zf-CHC2 [H]
EC number: 2.7.7.- [C]
Molecular weight: Translated: 65992; Mature: 65861
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSNMSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKK CCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCEEEEHH QFYHCFGCGASGNAISFVMNYLNQGFTDAVETLATRLGLSVPRDGTGEKHKSSLNLYNLM HHHEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPNNQRELLS HHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH TGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSR CCCEEECCCCHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHH ELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKH HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEECCCCE LIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQ EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHH QATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLTHIES HHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHIL HHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHCCCHHHHH LKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQ HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC NREILIRQYIEKSRKTGLTEAERLSLQNLLKERHGQAEIEK CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSNMSGLIPQPFIDDLLNRTDLVELIDGYVPLKKRGNSHIACCPFHNEKTPSFNVVAKK CCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCHHHCCCCCEEEECCCCCCCCCCEEEEHH QFYHCFGCGASGNAISFVMNYLNQGFTDAVETLATRLGLSVPRDGTGEKHKSSLNLYNLM HHHEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH SEVSQYYQKKLKYNGQVAIDYLRNRGLSGEIAKRYHLGYAPEGWHNLEKAFPNNQRELLS HHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHH TGMLIKSDEGKIYDRYRNRIMFPIHDRNGRVIGFGGRVLDKDQKPKYLNSPETVLFQKSR CCCEEECCCCHHHHHHHCCEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHH ELYGLHQVLSQQKNPDSIIVVEGYMDVIALAQHGIFNVVATLGTATSTFHIQLLAKHTKH HHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEECCCCE LIFCFDGDAAGKQAAWRALESSLPHLNAGLDAGFIFLPNEHDPDSLVRNEGKNGFLELLQ EEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHCCCCHHHHHHHH QATPLHRFFFDTLSKDINLSNPAGKTQLINAVKPYLQKMVEGSYKQLLIDDLSRLTHIES HHCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH HRLTNLITDKSESKPEVQAAISRSPLRIAIALLLQNPEIYSIAIQQINPALLHEQEHHIL HHHHHHHCCCCCCCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHCCCHHHHH LKLLQQLKDKPNANTATLIEFWRNSSYFELIVKLAAWDHQVPEQELTKEFIDVLLFLQKQ HHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC NREILIRQYIEKSRKTGLTEAERLSLQNLLKERHGQAEIEK CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups; Nucleotidyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA