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The map label for this gene is sseJ

Identifier: 52842553

GI number: 52842553

Start: 2645922

End: 2646899

Strand: Reverse

Name: sseJ

Synonym: lpg2343

Alternate gene names: NA

Gene position: 2646899-2645922 (Counterclockwise)

Preceding gene: 52842555

Following gene: 52842552

Centisome position: 77.9

GC content: 39.06

Gene sequence:

>978_bases
TTGAATGAACCTAAAGATATAAAATCAATCTATTATTTAAGGGGTTTCATGAAACTATTAGCATCTTTGTGTGCTTTTTT
ATTGTCGGGAGCTGTTAGCGCGACACCACTTAATAACATAGTTGTATTTGGTGATAGTTTGTCGGATAACGGTAACTTAT
ATGAATACATGAAACACCAACTTCCTCAATCCCCCCCTTATTTTGAAGGTCGTTTTTCCAATGGCCCAGTATGGATAGAA
CGTCTGGCAGCTTCATACTTCCCAAATGATCCCAACTCTCATTTGCTGGATTATGCTTTTGGCGGAGCAGGAGTCTCTGT
CGATGAAGAAGATGATGAAGTATTTTTTACCTTAAGAAGAGAAGTGAATTCTTATTTGTTAGCACATCAGGATAAAGCAA
GCCCTGACAGTCTTTTTGTTATTTGGATAGGGGCAAATAATTACCTCGGAATGCCTGTTGAAGTGGACGAAACGCTTAAA
AATGTTAACCGAGGGATTACGGATAGCATACAACGTTTGGTAGACAAGGGAGCGAAGCATATTTTAGTTCTCAATTTACC
TGATTTGGGAAGAACTCCTGCCGCTCTGGAGTTTGGCTCTGTTGAAGAGATGACCTATTTCTCAACACAGCATAATAATG
CATTATCCAATACAGTCGATTATTTTAAAAAAACTTATCCTGAAGTTGAGTGGTTGTTTTTTGACACGGGTAGTCATTTT
GACCATGTGATAGAACATGCTGCAGAGTATGGATTTACAAATATAACAGGTACCTGCTCCTTTTCGATAGTAGATGAGAT
TACTAAAAACTCGGTTTTGAAGATGGTTGCGTCTGTGAAGCCAGAATTGACAGAAAGCGCATGTGATGGTTATTTGTTTT
TTGATTTGGTTCATCCGACAGCGTTGGCACATAAAATAATGGCAGAAAAAGCGCGTTTGATGCTGGATGAAGCTGGTGTG
GAGTTCGCCGAGAATTAA

Upstream 100 bases:

>100_bases
ACAGGATTTACTATAATTAGGTTTCTGTTTTAGATCAACAAAAAATTTATATACAGTAATGTGTTAAATGCCGTGGAAAA
ATTGATAAATCATTATATAA

Downstream 100 bases:

>100_bases
GAGTTTTTTATGGTGATAGCAAATGCAACTTGCATCGTCATTCAAATGAATCCGCAATGATAAGAACGGGGATTTTATAC
TGAGCAGAACCCAATGAGAG

Product: lysophospholipase A

Products: NA

Alternate protein names: Glycerophospholipid-cholesterol acyltransferase; GCAT [H]

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MNEPKDIKSIYYLRGFMKLLASLCAFLLSGAVSATPLNNIVVFGDSLSDNGNLYEYMKHQLPQSPPYFEGRFSNGPVWIE
RLAASYFPNDPNSHLLDYAFGGAGVSVDEEDDEVFFTLRREVNSYLLAHQDKASPDSLFVIWIGANNYLGMPVEVDETLK
NVNRGITDSIQRLVDKGAKHILVLNLPDLGRTPAALEFGSVEEMTYFSTQHNNALSNTVDYFKKTYPEVEWLFFDTGSHF
DHVIEHAAEYGFTNITGTCSFSIVDEITKNSVLKMVASVKPELTESACDGYLFFDLVHPTALAHKIMAEKARLMLDEAGV
EFAEN

Sequences:

>Translated_325_residues
MNEPKDIKSIYYLRGFMKLLASLCAFLLSGAVSATPLNNIVVFGDSLSDNGNLYEYMKHQLPQSPPYFEGRFSNGPVWIE
RLAASYFPNDPNSHLLDYAFGGAGVSVDEEDDEVFFTLRREVNSYLLAHQDKASPDSLFVIWIGANNYLGMPVEVDETLK
NVNRGITDSIQRLVDKGAKHILVLNLPDLGRTPAALEFGSVEEMTYFSTQHNNALSNTVDYFKKTYPEVEWLFFDTGSHF
DHVIEHAAEYGFTNITGTCSFSIVDEITKNSVLKMVASVKPELTESACDGYLFFDLVHPTALAHKIMAEKARLMLDEAGV
EFAEN
>Mature_325_residues
MNEPKDIKSIYYLRGFMKLLASLCAFLLSGAVSATPLNNIVVFGDSLSDNGNLYEYMKHQLPQSPPYFEGRFSNGPVWIE
RLAASYFPNDPNSHLLDYAFGGAGVSVDEEDDEVFFTLRREVNSYLLAHQDKASPDSLFVIWIGANNYLGMPVEVDETLK
NVNRGITDSIQRLVDKGAKHILVLNLPDLGRTPAALEFGSVEEMTYFSTQHNNALSNTVDYFKKTYPEVEWLFFDTGSHF
DHVIEHAAEYGFTNITGTCSFSIVDEITKNSVLKMVASVKPELTESACDGYLFFDLVHPTALAHKIMAEKARLMLDEAGV
EFAEN

Specific function: Fatty acid transfer between phosphatidylcholine and cholesterol [H]

COG id: COG3240

COG function: function code IR; Phospholipase/lecithinase/hemolysin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'GDSL' lipolytic enzyme family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087
- InterPro:   IPR008265 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: =2.3.1.43 [H]

Molecular weight: Translated: 36342; Mature: 36342

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEPKDIKSIYYLRGFMKLLASLCAFLLSGAVSATPLNNIVVFGDSLSDNGNLYEYMKHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
LPQSPPYFEGRFSNGPVWIERLAASYFPNDPNSHLLDYAFGGAGVSVDEEDDEVFFTLRR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEECCCCCCCCCCCCHHHHHHHH
EVNSYLLAHQDKASPDSLFVIWIGANNYLGMPVEVDETLKNVNRGITDSIQRLVDKGAKH
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCE
ILVLNLPDLGRTPAALEFGSVEEMTYFSTQHNNALSNTVDYFKKTYPEVEWLFFDTGSHF
EEEEECCCCCCCCCEEECCCCHHHHEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHH
DHVIEHAAEYGFTNITGTCSFSIVDEITKNSVLKMVASVKPELTESACDGYLFFDLVHPT
HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHH
ALAHKIMAEKARLMLDEAGVEFAEN
HHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNEPKDIKSIYYLRGFMKLLASLCAFLLSGAVSATPLNNIVVFGDSLSDNGNLYEYMKHQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
LPQSPPYFEGRFSNGPVWIERLAASYFPNDPNSHLLDYAFGGAGVSVDEEDDEVFFTLRR
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEHEEECCCCCCCCCCCCHHHHHHHH
EVNSYLLAHQDKASPDSLFVIWIGANNYLGMPVEVDETLKNVNRGITDSIQRLVDKGAKH
HHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCE
ILVLNLPDLGRTPAALEFGSVEEMTYFSTQHNNALSNTVDYFKKTYPEVEWLFFDTGSHF
EEEEECCCCCCCCCEEECCCCHHHHEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCHH
DHVIEHAAEYGFTNITGTCSFSIVDEITKNSVLKMVASVKPELTESACDGYLFFDLVHPT
HHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEHHHHH
ALAHKIMAEKARLMLDEAGVEFAEN
HHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2271578; 3280033; 1985976; 8294469 [H]