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The map label for this gene is 52842437

Identifier: 52842437

GI number: 52842437

Start: 2512062

End: 2513843

Strand: Direct

Name: 52842437

Synonym: lpg2224

Alternate gene names: NA

Gene position: 2512062-2513843 (Clockwise)

Preceding gene: 52842432

Following gene: 52842441

Centisome position: 73.93

GC content: 42.59

Gene sequence:

>1782_bases
ATGAAAGAACCTCGTGAACTTAATCGCCAACCCAATCCAGAACACATGGCTCAACTCATTAAAGACACGCCCAAAGACGT
TTGGTTTCATCTCGCAAAATATCTTCCTGACCATGAATTACTCAACCTCATGCAAGTCGACAAACGCTTAAATCGCTTCT
TCAAAGAAGGTACCCCCCCAAAAGAAATAATAAAAAAAATAGAACACGCCCCCCTTAAGGTCGTTTCTTCAGGCGTCAAT
ACCTTCATTCTAACCCAATACCACGGCAAACCACTCTTACTCGCCTGCGGACAAAACAAAGACGGTCAATTAGGCTGTGG
GGATACGAAAATTAGAACAGCACTCACCCCTGTCAATATCCCTGAATCATTTGCCTCCATCGAGTCGGTGCAGATCAGTC
TTTTCCATGCAGTGCTTTGGGGACGTGATAAAGACAATAAGCCGATACTAGCGACTTGCGGATTAAATGATAAAGGTCAG
CTGGGTTGTGGAGACTATAAGTCTAGAGCATTATTCACCCAAGTCAAATTAGCAGAAGACATCACTTCCATCGAATCAGT
AGAAATCAACATTTTCCATTCTGTGATTTTAGGCCATGATAAACATAACAGACCAGTACTTGCATCCTGTGGAAGCAATC
ACTTGGGTAAATTAGGTTGTGGAGACATAAAAGATAAAACAACATTCACCCGAATGAAATTACCTACAGAAATTGTTTCC
ATAGATACTTTACAGATGAATTGGCATACAATTGTTTCAGGACGCGATAAGAATAACAAACCAGTACTGGCAGCTTGTGG
ATGGAATGATAGAGGCCAACTAGGGTGTGGGGATAAAAAGGAAAGAGCATTACTCACCCCAGTCAAGTTACCTGAAAACA
TCGTTTCCATCCAATCAGCACAAATTGGCACCAGTCGTACTACAGTTCTAGGTCGCGATAAAGACAATAAACCGATACTT
ACCTATTGTGGATGGAATGAAAGAAACCAAATGGGTTGGAGTAACACTGAAGATAAAACAGCACTCACCCCAGCAAAATT
ACCTGAAAACATCGTTTCCATTGAGTTAATGCAAATCAGTACTAGCCGCACTGTAATTTTAGGTCGCGATAAAAACAACA
AACCAATATTGGCTGCTTGTGGGCTAAATAATCACGGTCAACTTGGGTGCGGTGATATTAAAACCAGAACAACTCTTTAT
CCAATCAAATTCCCCAAAGACATTGTTTCTATTGAGTCGGTGCAAATCAGTGATAACCATACGGTGATTTTGGGAAGAGA
TAAGCACAAGAATCCGATAATAGCAGCCTGTGGACTTAATAATTACGGTCAACTAGGCTGTGGGGATACAAAAAACAGAA
TGCTACTCACACCCATCAAACTGCCCAAAGAGATAGTTTGCATAGACTCCGTGACAGTAAAATACAGCAGCCTTTTTGTT
TCAGGTCGTGATAAAAACCATCGTCCCATACTGGCGGCTTGCGGGGATAATCGCTACGGTCAACTTGGGGTTCCAAGCAA
GAAACTTCTAACCGAACTGACCATCGTTCCCACACCCATTCTCACATTGCCTGCAACACCAAAAAGAGAGGCTTCTTCCA
GGAAAGAGGCTACAGAGAAAGCTCTAGTCTTTGCTACCCATGGCAGCAGAGAGCAAAAACCCCGAAAAAGCAATAGGATA
CTCACTGCAATCATTGCATCATTCGGTCGTTTTTTTACTGGAGCACATCCTCATACTCCGGACTCCGATAAAGAAAGCCC
TTCACCCAAACGAAGCGCCTAA

Upstream 100 bases:

>100_bases
CTTTACAACGAGTTTATCGAAAATGATGGGATTAAGATAGGTTACTTTAATCCTATTTTTATAATTACTCACATAATTTA
ACTAATGGAAAATATATATC

Downstream 100 bases:

>100_bases
GCAAAACATGCATTTTAGAAGCAAGAGGATCCAAAAGTCCTCTTATGCTCGTTCATCAATTGATTGTTTTTTGAATTCCA
TTTGTCCTATTGTTTGATAC

Product: UVB-resistance protein UVR8

Products: NA

Alternate protein names: S-Layer Domain Protein; RCC1 Repeat-Containing Protein; Cell Wall Anchor Domain-Containing Protein

Number of amino acids: Translated: 593; Mature: 593

Protein sequence:

>593_residues
MKEPRELNRQPNPEHMAQLIKDTPKDVWFHLAKYLPDHELLNLMQVDKRLNRFFKEGTPPKEIIKKIEHAPLKVVSSGVN
TFILTQYHGKPLLLACGQNKDGQLGCGDTKIRTALTPVNIPESFASIESVQISLFHAVLWGRDKDNKPILATCGLNDKGQ
LGCGDYKSRALFTQVKLAEDITSIESVEINIFHSVILGHDKHNRPVLASCGSNHLGKLGCGDIKDKTTFTRMKLPTEIVS
IDTLQMNWHTIVSGRDKNNKPVLAACGWNDRGQLGCGDKKERALLTPVKLPENIVSIQSAQIGTSRTTVLGRDKDNKPIL
TYCGWNERNQMGWSNTEDKTALTPAKLPENIVSIELMQISTSRTVILGRDKNNKPILAACGLNNHGQLGCGDIKTRTTLY
PIKFPKDIVSIESVQISDNHTVILGRDKHKNPIIAACGLNNYGQLGCGDTKNRMLLTPIKLPKEIVCIDSVTVKYSSLFV
SGRDKNHRPILAACGDNRYGQLGVPSKKLLTELTIVPTPILTLPATPKREASSRKEATEKALVFATHGSREQKPRKSNRI
LTAIIASFGRFFTGAHPHTPDSDKESPSPKRSA

Sequences:

>Translated_593_residues
MKEPRELNRQPNPEHMAQLIKDTPKDVWFHLAKYLPDHELLNLMQVDKRLNRFFKEGTPPKEIIKKIEHAPLKVVSSGVN
TFILTQYHGKPLLLACGQNKDGQLGCGDTKIRTALTPVNIPESFASIESVQISLFHAVLWGRDKDNKPILATCGLNDKGQ
LGCGDYKSRALFTQVKLAEDITSIESVEINIFHSVILGHDKHNRPVLASCGSNHLGKLGCGDIKDKTTFTRMKLPTEIVS
IDTLQMNWHTIVSGRDKNNKPVLAACGWNDRGQLGCGDKKERALLTPVKLPENIVSIQSAQIGTSRTTVLGRDKDNKPIL
TYCGWNERNQMGWSNTEDKTALTPAKLPENIVSIELMQISTSRTVILGRDKNNKPILAACGLNNHGQLGCGDIKTRTTLY
PIKFPKDIVSIESVQISDNHTVILGRDKHKNPIIAACGLNNYGQLGCGDTKNRMLLTPIKLPKEIVCIDSVTVKYSSLFV
SGRDKNHRPILAACGDNRYGQLGVPSKKLLTELTIVPTPILTLPATPKREASSRKEATEKALVFATHGSREQKPRKSNRI
LTAIIASFGRFFTGAHPHTPDSDKESPSPKRSA
>Mature_593_residues
MKEPRELNRQPNPEHMAQLIKDTPKDVWFHLAKYLPDHELLNLMQVDKRLNRFFKEGTPPKEIIKKIEHAPLKVVSSGVN
TFILTQYHGKPLLLACGQNKDGQLGCGDTKIRTALTPVNIPESFASIESVQISLFHAVLWGRDKDNKPILATCGLNDKGQ
LGCGDYKSRALFTQVKLAEDITSIESVEINIFHSVILGHDKHNRPVLASCGSNHLGKLGCGDIKDKTTFTRMKLPTEIVS
IDTLQMNWHTIVSGRDKNNKPVLAACGWNDRGQLGCGDKKERALLTPVKLPENIVSIQSAQIGTSRTTVLGRDKDNKPIL
TYCGWNERNQMGWSNTEDKTALTPAKLPENIVSIELMQISTSRTVILGRDKNNKPILAACGLNNHGQLGCGDIKTRTTLY
PIKFPKDIVSIESVQISDNHTVILGRDKHKNPIIAACGLNNYGQLGCGDTKNRMLLTPIKLPKEIVCIDSVTVKYSSLFV
SGRDKNHRPILAACGDNRYGQLGVPSKKLLTELTIVPTPILTLPATPKREASSRKEATEKALVFATHGSREQKPRKSNRI
LTAIIASFGRFFTGAHPHTPDSDKESPSPKRSA

Specific function: Unknown

COG id: COG5184

COG function: function code DZ; Alpha-tubulin suppressor and related RCC1 domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65524; Mature: 65524

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50181 FBOX ; PS50012 RCC1_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEPRELNRQPNPEHMAQLIKDTPKDVWFHLAKYLPDHELLNLMQVDKRLNRFFKEGTPP
CCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
KEIIKKIEHAPLKVVSSGVNTFILTQYHGKPLLLACGQNKDGQLGCGDTKIRTALTPVNI
HHHHHHHCCCCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCC
PESFASIESVQISLFHAVLWGRDKDNKPILATCGLNDKGQLGCGDYKSRALFTQVKLAED
CHHHHHHHHHHHEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
ITSIESVEINIFHSVILGHDKHNRPVLASCGSNHLGKLGCGDIKDKTTFTRMKLPTEIVS
HHCHHEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
IDTLQMNWHTIVSGRDKNNKPVLAACGWNDRGQLGCGDKKERALLTPVKLPENIVSIQSA
EEEEEECEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHC
QIGTSRTTVLGRDKDNKPILTYCGWNERNQMGWSNTEDKTALTPAKLPENIVSIELMQIS
CCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEE
TSRTVILGRDKNNKPILAACGLNNHGQLGCGDIKTRTTLYPIKFPKDIVSIESVQISDNH
CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHEEEEEEEECCCE
TVILGRDKHKNPIIAACGLNNYGQLGCGDTKNRMLLTPIKLPKEIVCIDSVTVKYSSLFV
EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEEEE
SGRDKNHRPILAACGDNRYGQLGVPSKKLLTELTIVPTPILTLPATPKREASSRKEATEK
ECCCCCCCCEEEECCCCCCCCCCCCHHHHHHEEEECCCCEEECCCCCCHHHHHHHHHCCE
ALVFATHGSREQKPRKSNRILTAIIASFGRFFTGAHPHTPDSDKESPSPKRSA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKEPRELNRQPNPEHMAQLIKDTPKDVWFHLAKYLPDHELLNLMQVDKRLNRFFKEGTPP
CCCCHHCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCH
KEIIKKIEHAPLKVVSSGVNTFILTQYHGKPLLLACGQNKDGQLGCGDTKIRTALTPVNI
HHHHHHHCCCCHHHHHCCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCC
PESFASIESVQISLFHAVLWGRDKDNKPILATCGLNDKGQLGCGDYKSRALFTQVKLAED
CHHHHHHHHHHHEEEEHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH
ITSIESVEINIFHSVILGHDKHNRPVLASCGSNHLGKLGCGDIKDKTTFTRMKLPTEIVS
HHCHHEEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEECCCEEEE
IDTLQMNWHTIVSGRDKNNKPVLAACGWNDRGQLGCGDKKERALLTPVKLPENIVSIQSA
EEEEEECEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHC
QIGTSRTTVLGRDKDNKPILTYCGWNERNQMGWSNTEDKTALTPAKLPENIVSIELMQIS
CCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEEEEE
TSRTVILGRDKNNKPILAACGLNNHGQLGCGDIKTRTTLYPIKFPKDIVSIESVQISDNH
CCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCCHHHEEEEEEEECCCE
TVILGRDKHKNPIIAACGLNNYGQLGCGDTKNRMLLTPIKLPKEIVCIDSVTVKYSSLFV
EEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEEEE
SGRDKNHRPILAACGDNRYGQLGVPSKKLLTELTIVPTPILTLPATPKREASSRKEATEK
ECCCCCCCCEEEECCCCCCCCCCCCHHHHHHEEEECCCCEEECCCCCCHHHHHHHHHCCE
ALVFATHGSREQKPRKSNRILTAIIASFGRFFTGAHPHTPDSDKESPSPKRSA
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA