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The map label for this gene is yeaW [H]

Identifier: 52842431

GI number: 52842431

Start: 2503751

End: 2504842

Strand: Direct

Name: yeaW [H]

Synonym: lpg2218

Alternate gene names: 52842431

Gene position: 2503751-2504842 (Clockwise)

Preceding gene: 52842426

Following gene: 52842432

Centisome position: 73.69

GC content: 38.1

Gene sequence:

>1092_bases
ATGTTCATGAAGAATCTCTATATAGATCCTGATATTACAAAAGCTTCCACAATCTCTTCTGAATTTTATACATCAACGGA
ATGGTTTGAAATTACAAAAGAAAAGATATTTAGTAAAACCTGGCAGTTTTGTATCAGTACCGAAGAATTAACAACTAATA
GGCAATTAATTCCTTTTACCTTGCTGCCTGGATATCTTGAAGAACCCTTACTGTTTGCAAAAGATGAATTGGGTACAATT
CGTTGTTTGAGTAATGTATGTACCCATCGAGGTAAAATTCTCATTGAAGAGCCTTGCGTGGCGCATAAAATCAAATGCTC
TTATCATGGCCGTCGGTTTAATTTTTGTGGCGAATTACTTCATATGCCTGAATTTGAACTCACAAAAGATTTCCCATCAA
ACAATGATAACCTAAGTCAAATTTCAACGGGTATTCTTGAGCCTTTTCTCTTTGCTTCGCTCTCACCAGTTGTCCCATTT
CATGAAGTTTTTGCAGAAATTAAAGAAAGGTTGTTTTGGCTCCCTATGGAAAAAATGCGCCTGGATAAAGAAAAATGCAA
AGATTATGTAGTTAAATCGCATTGGGCCTTATACTGTGAAAATTACCTTGAAGCGTTACATATCCCTTTTGTACATCCCT
CGCTAAGAAAAGTAATCGATTGCAACACCTACACCACAGAGCTCTTCCGCTACTGTAATCTGCAATTGGCTTTGGCAAGC
CCTGATGAAGTCAGCTTTGATTTACCCAAAGGGGCGCAAGATTATGGCAAACAAGTTGCTGCCTATTACTTTTGGATATT
CCCCAATACGATGCTTAATTTTTATCCCTGGGGTTGTTCTGTGAATGTAGTCAAACCACTTAGTCCTGAGTTAACTCAGG
TTTCCTTTTTATCTTTTGTTCTTGATGAATCAAAATTTGGGAAAGGCGCTGGTGGAGCACTTGACCAGGTTGAACAAGAA
GATGAAAGAGTGGTGGAGTCTGTGCAAAGGGGGATAAAATCTCGCTATTATGATATAGGGCGTTTCTCCCCAACAAAAGA
ACAGGGCACTCATCATTTTCAAAGACTACTTTGTGAGTTTCTTAATGATTGA

Upstream 100 bases:

>100_bases
TTTGCACTACCTTTTATCAGACTTTAACCATCGCTTCACCGAAAGAAATGGTTAAAATTTTTATTCTCTTTTTGCAGGTT
TTTCTCTTTACGGTAAGGAA

Downstream 100 bases:

>100_bases
AATTAGATCTGTCACATGCTCAGACTTGGAACGAAAAAATATTTTTAATAAACGATTTAGATCAATTAAGTAACTGAGTT
AGAATTATTTTTAGATAACG

Product: choline monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MFMKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGYLEEPLLFAKDELGTI
RCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSNNDNLSQISTGILEPFLFASLSPVVPF
HEVFAEIKERLFWLPMEKMRLDKEKCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS
PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKFGKGAGGALDQVEQE
DERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQRLLCEFLND

Sequences:

>Translated_363_residues
MFMKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGYLEEPLLFAKDELGTI
RCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSNNDNLSQISTGILEPFLFASLSPVVPF
HEVFAEIKERLFWLPMEKMRLDKEKCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS
PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKFGKGAGGALDQVEQE
DERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQRLLCEFLND
>Mature_363_residues
MFMKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFTLLPGYLEEPLLFAKDELGTI
RCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELLHMPEFELTKDFPSNNDNLSQISTGILEPFLFASLSPVVPF
HEVFAEIKERLFWLPMEKMRLDKEKCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS
PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFVLDESKFGKGAGGALDQVEQE
DERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQRLLCEFLND

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=364, Percent_Identity=26.6483516483516, Blast_Score=116, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 42168; Mature: 42168

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00570 RING_HYDROXYL_ALPHA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFT
CCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEE
LLPGYLEEPLLFAKDELGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELL
ECCHHHHCCCEEHHCCCHHHHHHHHHHHCCCCEEEECCCCHHEEEECCCCCHHHHHHHHH
HMPEFELTKDFPSNNDNLSQISTGILEPFLFASLSPVVPFHEVFAEIKERLFWLPMEKMR
CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LDKEKCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCEEEECC
PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFV
CCCCEEECCCCHHHHHHHHHHHEEEEECCCHHEEECCCCCEEEECCCCCCHHHHHHHHHH
LDESKFGKGAGGALDQVEQEDERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQRLLCEF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHH
LND
HCC
>Mature Secondary Structure
MFMKNLYIDPDITKASTISSEFYTSTEWFEITKEKIFSKTWQFCISTEELTTNRQLIPFT
CCCCCEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHHCCCCEEEEEE
LLPGYLEEPLLFAKDELGTIRCLSNVCTHRGKILIEEPCVAHKIKCSYHGRRFNFCGELL
ECCHHHHCCCEEHHCCCHHHHHHHHHHHCCCCEEEECCCCHHEEEECCCCCHHHHHHHHH
HMPEFELTKDFPSNNDNLSQISTGILEPFLFASLSPVVPFHEVFAEIKERLFWLPMEKMR
CCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHH
LDKEKCKDYVVKSHWALYCENYLEALHIPFVHPSLRKVIDCNTYTTELFRYCNLQLALAS
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCEEEECC
PDEVSFDLPKGAQDYGKQVAAYYFWIFPNTMLNFYPWGCSVNVVKPLSPELTQVSFLSFV
CCCCEEECCCCHHHHHHHHHHHEEEEECCCHHEEECCCCCEEEECCCCCCHHHHHHHHHH
LDESKFGKGAGGALDQVEQEDERVVESVQRGIKSRYYDIGRFSPTKEQGTHHFQRLLCEF
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHECCCCCCCCHHHHHHHHHHHHHHH
LND
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]