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The map label for this gene is yjbQ [H]

Identifier: 52842424

GI number: 52842424

Start: 2495267

End: 2495671

Strand: Reverse

Name: yjbQ [H]

Synonym: lpg2211

Alternate gene names: 52842424

Gene position: 2495671-2495267 (Counterclockwise)

Preceding gene: 52842427

Following gene: 52842423

Centisome position: 73.45

GC content: 37.04

Gene sequence:

>405_bases
ATGGTACAACATGATATAATCAAACTGCCTCCAAAACCTTATGGTGCTCATCTAATCACTAATGAAGTGATGCAAAAAAT
TACGTTGAGGGGTACCGGATTATTACATTTATTTATTCAGCATACCTCTGCGGCACTTGCCTTAAATGAAAATGCTTCCC
CTGATGTATTGATTGATCTAAACCATTTCTTTACTCAACTTGTTCCTGAACATCAGCATTATCGTCATGATATAGAGGGG
CCAGATGATATGCCCGCCCATATTAAATCAATTTTGTGTGGCTCATCTTTAACTATTCCATTTCAGGAAAACAAGTTGCT
ATTGGGTGTTTGGCAAGGCATTTATTTAATGGAATTCAGAAAACAAGCAGGAGCAAGAACAATTGTTGCCAGTCAATTGA
TTTAG

Upstream 100 bases:

>100_bases
GAGGCGCTACTTTATTTATAATGCAAATAGAGTTTATGGACAGAATTTCATTTTGTTCTGACTCGACAATTCCTCCGTTA
TCCAATTAAGTCGAGGGTCT

Downstream 100 bases:

>100_bases
GATCATAGGGCATAACTCTACTCACCATTGAATTAATCTGAGCAATGCATGTATCTTTCTGTGTTTCATTCACAGGATAA
ATACCTCCTGTTCTTAACTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MVQHDIIKLPPKPYGAHLITNEVMQKITLRGTGLLHLFIQHTSAALALNENASPDVLIDLNHFFTQLVPEHQHYRHDIEG
PDDMPAHIKSILCGSSLTIPFQENKLLLGVWQGIYLMEFRKQAGARTIVASQLI

Sequences:

>Translated_134_residues
MVQHDIIKLPPKPYGAHLITNEVMQKITLRGTGLLHLFIQHTSAALALNENASPDVLIDLNHFFTQLVPEHQHYRHDIEG
PDDMPAHIKSILCGSSLTIPFQENKLLLGVWQGIYLMEFRKQAGARTIVASQLI
>Mature_134_residues
MVQHDIIKLPPKPYGAHLITNEVMQKITLRGTGLLHLFIQHTSAALALNENASPDVLIDLNHFFTQLVPEHQHYRHDIEG
PDDMPAHIKSILCGSSLTIPFQENKLLLGVWQGIYLMEFRKQAGARTIVASQLI

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=134, Percent_Identity=44.0298507462687, Blast_Score=124, Evalue=2e-30,
Organism=Drosophila melanogaster, GI221476589, Length=126, Percent_Identity=50.7936507936508, Blast_Score=130, Evalue=3e-31,
Organism=Drosophila melanogaster, GI221476594, Length=126, Percent_Identity=50.7936507936508, Blast_Score=130, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 15081; Mature: 15081

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQHDIIKLPPKPYGAHLITNEVMQKITLRGTGLLHLFIQHTSAALALNENASPDVLIDL
CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEH
NHFFTQLVPEHQHYRHDIEGPDDMPAHIKSILCGSSLTIPFQENKLLLGVWQGIYLMEFR
HHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHH
KQAGARTIVASQLI
HHCCCHHHHHHHCC
>Mature Secondary Structure
MVQHDIIKLPPKPYGAHLITNEVMQKITLRGTGLLHLFIQHTSAALALNENASPDVLIDL
CCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCCCCCEEEEH
NHFFTQLVPEHQHYRHDIEGPDDMPAHIKSILCGSSLTIPFQENKLLLGVWQGIYLMEFR
HHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHHHHH
KQAGARTIVASQLI
HHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]