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The map label for this gene is 52842416

Identifier: 52842416

GI number: 52842416

Start: 2485291

End: 2486850

Strand: Reverse

Name: 52842416

Synonym: lpg2203

Alternate gene names: NA

Gene position: 2486850-2485291 (Counterclockwise)

Preceding gene: 52842417

Following gene: 52842415

Centisome position: 73.19

GC content: 37.95

Gene sequence:

>1560_bases
TTGATGATGCGTATTTTTTCCAGGTTTTCTGACAGGCTGGTCATCTTTGCTTTTCTGGTAATCATTTTTGTACCAGGGAT
TGGTATGTTTTTTGAAAAACAAGCGGATGAAGTGAGATCTCTGTTAAACAGAGAACCTCATCAACTCCCTCCCATTAATA
TAAAAAAAATAGGTCGTACTGATTTCAAGGGCATAGAAAATTGGTTTGTTGATCATACCTTGTTCATGACTTCGTTGAGT
AAATTCTGGAGTCATGTCGTATATCAGTTGGGAACCAGCATCAAACCTGGGCAAGCCATTTTGGGGAAAGAGGATTGGCT
GTTTTTGGGCAATGATTACGCGGCATCCATCGATCAGTACACAGGGAGAAATAAGCCTACCGAGGAAGAAGTTCTCTTGA
AATTATCTGTTTTAAAACAGATGAATCATCTGGCTAAACAAAATGACATTCCTTTTCTGGTGGTCATTGCCCCAGATAAA
CATGAGATTTATCCGGAATATTTACCGGCTAACGTTCATAAAAGCTCCAATAAGAACAGGCTTGACCTTTTACAAGAGGG
AATGCTTGCTCGAGGTATTGATTTTATCAATTTGAGACAAAAGGAAATGGAAGCCAAAAATACTCTTGGCAAACAGTATG
GAGATCTTTATTTAAAGGGGGATAGTCACTGGAATTATGTTGGTGCTTATGTTGCTTACCAGGCAATATCAGATTACATG
CGGCAAAAAGGGTTACAGAGCAGACAATTACAATTTAATTTCATACCCAGAGAAACCACCTACTCTGATCTTACCAATTT
TCTGCAGTTGACGCATATCAAATCCAATAATCCTCTTCCCGATGTTTCAAATTTAAAAATCGATTTGTTTGGCAGAGACA
TTGATGGAAAAGAGATTAAATTGGATGATTTTCAGGGCAATCCAAATGGTGTAATCCTCATTGCGCCTTACGAGAATATT
AATAAAGCTGTACAAAACAAACAAACCTGTTTATTAATAGGAGACAGCTTTTCGGAGTCTCTCAGTTTTTATTTTCATAA
TGATTTTTATAATACAGTACGTATTCACTCCGGGAATACCTCCTGGAATTTGTCTGATTTAATTCAAAAATACCATCCTG
ATTTGATTGTGTATGAAAAAGTCGAGCGTGATTTGCTCTATCCACTCGTCAATTTTCAAACTACAGCAAATCAAGTGAAT
CTTGAACTCCCTAAACAGGTTTTAACCGCCAGGGGAGGAGTCGATAAATTCAAGATTGGCCCAGATACAATCTCAGTCAA
TGGCTGGGCTTATATTCCCGATTTAGATGCTGGAAATGGGGAAGTGTTTTTAAAGTTGTCGATGGGAACTCATACTTATT
TATACAGTATGAATAAAATGCAAAAACAAAGTGTTAATCTGGCTTTCAAACAGGATGGTAAGCATCTTGATTTGTCAGGA
TTTAATGGAACTATCTCGCGTAAGGATTTGCCTTCTGGCCTATATAAAGTATCACTCATTGTCGTAAACGACGAGGTGAT
GGGCGAAACGGAGCTTCCAGGCACTTATACTTTGAGTTAG

Upstream 100 bases:

>100_bases
CATACAAGCAATCCAGCAAGGTTTTGGGAATACTGCTTTTACTGGTTTCAATATTATTATTAAGCACTAATTCTTATAAC
CCTTTCCTCTATTTTAGGTT

Downstream 100 bases:

>100_bases
ATGGGATTTTTATAATCGAGCTGGAAGCAAATTGGCTACCGGGCAAAAAGAAATTTTAATGGAAGCTAAAAAGGAGTTGC
GATTATTAGCAAAAGACAAA

Product: alginate O-acetylation protein AlgJ

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MMMRIFSRFSDRLVIFAFLVIIFVPGIGMFFEKQADEVRSLLNREPHQLPPINIKKIGRTDFKGIENWFVDHTLFMTSLS
KFWSHVVYQLGTSIKPGQAILGKEDWLFLGNDYAASIDQYTGRNKPTEEEVLLKLSVLKQMNHLAKQNDIPFLVVIAPDK
HEIYPEYLPANVHKSSNKNRLDLLQEGMLARGIDFINLRQKEMEAKNTLGKQYGDLYLKGDSHWNYVGAYVAYQAISDYM
RQKGLQSRQLQFNFIPRETTYSDLTNFLQLTHIKSNNPLPDVSNLKIDLFGRDIDGKEIKLDDFQGNPNGVILIAPYENI
NKAVQNKQTCLLIGDSFSESLSFYFHNDFYNTVRIHSGNTSWNLSDLIQKYHPDLIVYEKVERDLLYPLVNFQTTANQVN
LELPKQVLTARGGVDKFKIGPDTISVNGWAYIPDLDAGNGEVFLKLSMGTHTYLYSMNKMQKQSVNLAFKQDGKHLDLSG
FNGTISRKDLPSGLYKVSLIVVNDEVMGETELPGTYTLS

Sequences:

>Translated_519_residues
MMMRIFSRFSDRLVIFAFLVIIFVPGIGMFFEKQADEVRSLLNREPHQLPPINIKKIGRTDFKGIENWFVDHTLFMTSLS
KFWSHVVYQLGTSIKPGQAILGKEDWLFLGNDYAASIDQYTGRNKPTEEEVLLKLSVLKQMNHLAKQNDIPFLVVIAPDK
HEIYPEYLPANVHKSSNKNRLDLLQEGMLARGIDFINLRQKEMEAKNTLGKQYGDLYLKGDSHWNYVGAYVAYQAISDYM
RQKGLQSRQLQFNFIPRETTYSDLTNFLQLTHIKSNNPLPDVSNLKIDLFGRDIDGKEIKLDDFQGNPNGVILIAPYENI
NKAVQNKQTCLLIGDSFSESLSFYFHNDFYNTVRIHSGNTSWNLSDLIQKYHPDLIVYEKVERDLLYPLVNFQTTANQVN
LELPKQVLTARGGVDKFKIGPDTISVNGWAYIPDLDAGNGEVFLKLSMGTHTYLYSMNKMQKQSVNLAFKQDGKHLDLSG
FNGTISRKDLPSGLYKVSLIVVNDEVMGETELPGTYTLS
>Mature_519_residues
MMMRIFSRFSDRLVIFAFLVIIFVPGIGMFFEKQADEVRSLLNREPHQLPPINIKKIGRTDFKGIENWFVDHTLFMTSLS
KFWSHVVYQLGTSIKPGQAILGKEDWLFLGNDYAASIDQYTGRNKPTEEEVLLKLSVLKQMNHLAKQNDIPFLVVIAPDK
HEIYPEYLPANVHKSSNKNRLDLLQEGMLARGIDFINLRQKEMEAKNTLGKQYGDLYLKGDSHWNYVGAYVAYQAISDYM
RQKGLQSRQLQFNFIPRETTYSDLTNFLQLTHIKSNNPLPDVSNLKIDLFGRDIDGKEIKLDDFQGNPNGVILIAPYENI
NKAVQNKQTCLLIGDSFSESLSFYFHNDFYNTVRIHSGNTSWNLSDLIQKYHPDLIVYEKVERDLLYPLVNFQTTANQVN
LELPKQVLTARGGVDKFKIGPDTISVNGWAYIPDLDAGNGEVFLKLSMGTHTYLYSMNKMQKQSVNLAFKQDGKHLDLSG
FNGTISRKDLPSGLYKVSLIVVNDEVMGETELPGTYTLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59285; Mature: 59285

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMRIFSRFSDRLVIFAFLVIIFVPGIGMFFEKQADEVRSLLNREPHQLPPINIKKIGRT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
DFKGIENWFVDHTLFMTSLSKFWSHVVYQLGTSIKPGQAILGKEDWLFLGNDYAASIDQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCHHHHHHHH
TGRNKPTEEEVLLKLSVLKQMNHLAKQNDIPFLVVIAPDKHEIYPEYLPANVHKSSNKNR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH
LDLLQEGMLARGIDFINLRQKEMEAKNTLGKQYGDLYLKGDSHWNYVGAYVAYQAISDYM
HHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH
RQKGLQSRQLQFNFIPRETTYSDLTNFLQLTHIKSNNPLPDVSNLKIDLFGRDIDGKEIK
HHCCCCCCCEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCEEE
LDDFQGNPNGVILIAPYENINKAVQNKQTCLLIGDSFSESLSFYFHNDFYNTVRIHSGNT
EECCCCCCCCEEEEECHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCC
SWNLSDLIQKYHPDLIVYEKVERDLLYPLVNFQTTANQVNLELPKQVLTARGGVDKFKIG
CCCHHHHHHHHCCCEEEEEHHHHHHHHHHHCCEECCCEEEEHHHHHHHHHCCCCCEEEEC
PDTISVNGWAYIPDLDAGNGEVFLKLSMGTHTYLYSMNKMQKQSVNLAFKQDGKHLDLSG
CCEEEECCEEECCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHCCEEEECCCCEEEECC
FNGTISRKDLPSGLYKVSLIVVNDEVMGETELPGTYTLS
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEECC
>Mature Secondary Structure
MMMRIFSRFSDRLVIFAFLVIIFVPGIGMFFEKQADEVRSLLNREPHQLPPINIKKIGRT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
DFKGIENWFVDHTLFMTSLSKFWSHVVYQLGTSIKPGQAILGKEDWLFLGNDYAASIDQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCEEEECCCHHHHHHHH
TGRNKPTEEEVLLKLSVLKQMNHLAKQNDIPFLVVIAPDKHEIYPEYLPANVHKSSNKNR
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCH
LDLLQEGMLARGIDFINLRQKEMEAKNTLGKQYGDLYLKGDSHWNYVGAYVAYQAISDYM
HHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHH
RQKGLQSRQLQFNFIPRETTYSDLTNFLQLTHIKSNNPLPDVSNLKIDLFGRDIDGKEIK
HHCCCCCCCEEEEECCCCCCHHHHHHHHEEEEECCCCCCCCCCCCEEEEEECCCCCCEEE
LDDFQGNPNGVILIAPYENINKAVQNKQTCLLIGDSFSESLSFYFHNDFYNTVRIHSGNT
EECCCCCCCCEEEEECHHHHHHHHCCCCEEEEEECCCCCCEEEEEECCCCEEEEEECCCC
SWNLSDLIQKYHPDLIVYEKVERDLLYPLVNFQTTANQVNLELPKQVLTARGGVDKFKIG
CCCHHHHHHHHCCCEEEEEHHHHHHHHHHHCCEECCCEEEEHHHHHHHHHCCCCCEEEEC
PDTISVNGWAYIPDLDAGNGEVFLKLSMGTHTYLYSMNKMQKQSVNLAFKQDGKHLDLSG
CCEEEECCEEECCCCCCCCCEEEEEEECCCEEEEEEHHHHHHHHCCEEEECCCCEEEECC
FNGTISRKDLPSGLYKVSLIVVNDEVMGETELPGTYTLS
CCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA