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The map label for this gene is 52842375

Identifier: 52842375

GI number: 52842375

Start: 2425676

End: 2427934

Strand: Direct

Name: 52842375

Synonym: lpg2161

Alternate gene names: NA

Gene position: 2425676-2427934 (Clockwise)

Preceding gene: 52842372

Following gene: 52842376

Centisome position: 71.39

GC content: 37.8

Gene sequence:

>2259_bases
ATGTTTGCCGAAATACCCAAAATTCAAGAGCAACTCCATAATGTTCTTGAATATTCCCAATCCATGACTTCTCTTTGGAT
GCAATCAATTGATAAAAGCCTTGAACAAACAAACAAGGTGACGCAATCTTTAATCAACTTAAATCAGCAACAAATTTATC
CTTATCCCAACATATTAAATGATGCCATTGAATATACCGTAGACTTCATGCAGAGAAGCATTCTGTTTTGGGACATCATG
CGCAAACGGGGCAATCAATATCTCAAGCATGAACAAGAAGGACAACCTCCTGTTCTCATTTTTTCTTATAATATGCTCAT
GGATGGCAGACATTTTGAGAGACCTGTAAATTATGCACTGGTGGAAATCATTCCCCCTGAAGGCATCCAGATTGATCCTG
CAAAAAGACCTTATGTGATTGTTGATCCGCGGGCTGGTCATGGAGCAGGAATCAGCGGTTTTAAAGACGCGTCACAAGTA
GGACTTGCCTTAAGGGCAGGACACCCAGTTTACGTTATTATCTTTTTCCCTGTTCCTGAACCCAATCAAACGCTGGTGGA
TGTCACCGCAGCCCACGAAAAATTTTTAACTGAAGTAGCCTTGCGTCACCCTCAAAGTCCCAAACCCTGCTTAATTGGTA
ATTGTCAGGGAGGATGGGCTATTTTAACCCTTATGGCCGCTAACCCAGATGTAGCAGGGGTCGCTGTAGTCAATGGCGCT
CCTCTTTCCTATTGGGGTGGGGAAAATGGAAAAAATCCCATGCGCTACATCGGAGGAATTTGGGGAGGGAGCTGGATCGC
ACAGATGGCTGGTGATTTGGGTAACGGCAAATTTGACGGGGCTAATTTGGTAATGAACTTCGAAATGGCTAATCCTAAAG
TCACTTACTGGAGCAAATATTACAATCTCTTTGCCAATCTTGATAAAGAAGAAATCCGATTTTTAAATTTTGAGCGATGG
TGGGGAGGTTTTTCTCTTTTGAATGTGAACGAAATGAGAGGAATAATTGATAATTTGTTTATTGGTAACAAACTGGTCCA
TGGCAAAATACCCTTGGGGCAATCGGGTAATAACCTGGATTTAAGAAACATTAGCGTGCCTGTTATTATTTTCTGCTCGG
AAGGCGACAACATTACACCACCCCAACAAGCCTTAAACTGGGTTTCTGATCTTTATTCAAATACTCTGGAAATCAAATTG
GATGGACAAGTTATTGTTTATCTTATCCATAAGAGTGTTGGTCATTTAGGTATTTTTGTCTCAAGTGAGGTGGCTAAAAA
AGAACATAACCAGATTATTGATTTATTAAATTACATAGAACATTTGGCTCCAGGTTTATATGAACTAAAACTGAATGAAA
CAAAAGAAAATCCCAAGTCACCCCCACATTACCTCGCTTATATTGAAGAGCGCTCTATTAACGACATCAGGAAAGGACAG
GAGAGTAATGTAGCAATCTTCAACCTTGTTCGTATGGTATCTGAATACAATGCCATGAGCTATGACTTGTTTATGGCTCC
GATAATCCGTAATATAAGTAACGAATACACTGCAGAATTGATTCGAAAATTACACCCACTAAGGCAGAATCAGTATTTAT
TGAGTGATCTGAATCCATTAGTGCACCCTGTATCATGGATATCACCTTTTATTCGTCAAAATCGCATTAAAATTTCTGAA
AATAATCCCTTTTTAACTCAGCAATTAAATTTTTCAAAGCTTATAAACGCATTATGGGATTTCTTCAGCGCGTCTCGTGA
TAATACTGTGGAACTAATGTTTTATGCTGTCTATGGCTACATTCAATTATTAGCTCCATTTGATCCCAGAAGAGATATGA
TTGTTCATTCCCCTGAAAAAGATAATCAGGAAAAAATAACTCAATCAATTATTGCCCATATTAGTGATGGAGGTGTACCA
GAGGCTATTTTGCGTATATTACTATTATTAGTGAAAATTCAAGGCTATATCATTGGCGCTAACTTACCTGATGTCATTCA
AAAACTACGTGAATGCAATGCTCTTAAACATTTAGATAAAAATGGATTCAAACAAATTGTGCACTCACAAACAATAATGA
TAGAGCATGATCCTGAACTTGCATTTAATACAATACCTCATTTACTGAAATCACAAGAAGAACGCTCAATGGTCATTCAA
TTCATTGAAGATATATTAAAATCTTTAAAAGTATCCCCTTCCGAAGAATATAAAAAGAAATTTCAAAGAATAAAAGAACT
GTTACAAAACCAGGTTTGA

Upstream 100 bases:

>100_bases
TGAAAAAAGAAGAGAATGATAGCAACATACACTGATAGTCAAAATTTGTTAATGATATAGAGTTAAAGAACCCCGAATTG
AGAGGCCACAGGAGAAAAAG

Downstream 100 bases:

>100_bases
TTTCCGAATTGGGCCATACTGCTCTCAATCAAGCCTAAACCTATAGATATCCTATTGGAAAATCAATCATTCATCTTTCA
GACAAATGAAATCCCCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 752; Mature: 752

Protein sequence:

>752_residues
MFAEIPKIQEQLHNVLEYSQSMTSLWMQSIDKSLEQTNKVTQSLINLNQQQIYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMRYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNETKENPKSPPHYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFFSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQV

Sequences:

>Translated_752_residues
MFAEIPKIQEQLHNVLEYSQSMTSLWMQSIDKSLEQTNKVTQSLINLNQQQIYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMRYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNETKENPKSPPHYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFFSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQV
>Mature_752_residues
MFAEIPKIQEQLHNVLEYSQSMTSLWMQSIDKSLEQTNKVTQSLINLNQQQIYPYPNILNDAIEYTVDFMQRSILFWDIM
RKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYALVEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQV
GLALRAGHPVYVIIFFPVPEPNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
PLSYWGGENGKNPMRYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKYYNLFANLDKEEIRFLNFERW
WGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLDLRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKL
DGQVIVYLIHKSVGHLGIFVSSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNETKENPKSPPHYLAYIEERSINDIRKGQ
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPLVHPVSWISPFIRQNRIKISE
NNPFLTQQLNFSKLINALWDFFSASRDNTVELMFYAVYGYIQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVP
EAILRILLLLVKIQGYIIGANLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQV

Specific function: Unknown

COG id: COG3243

COG function: function code I; Poly(3-hydroxyalkanoate) synthetase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85728; Mature: 85728

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAEIPKIQEQLHNVLEYSQSMTSLWMQSIDKSLEQTNKVTQSLINLNQQQIYPYPNILN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH
DAIEYTVDFMQRSILFWDIMRKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEE
VEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQVGLALRAGHPVYVIIFFPVPE
EEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHCEEEECCCCEEEEEEEECCC
PNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
CCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEECCC
PLSYWGGENGKNPMRYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKY
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHH
YNLFANLDKEEIRFLNFERWWGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLD
HHHHHCCCHHHHHEECHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCE
LRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKLDGQVIVYLIHKSVGHLGIFV
EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEEEEEHHCCCCEEEEE
SSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNETKENPKSPPHYLAYIEERSINDIRKGQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEHHCCHHHHHCCC
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCHH
VHPVSWISPFIRQNRIKISENNPFLTQQLNFSKLINALWDFFSASRDNTVELMFYAVYGY
HHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVPEAILRILLLLVKIQGYIIGA
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEC
NLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
CCHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFAEIPKIQEQLHNVLEYSQSMTSLWMQSIDKSLEQTNKVTQSLINLNQQQIYPYPNILN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHH
DAIEYTVDFMQRSILFWDIMRKRGNQYLKHEQEGQPPVLIFSYNMLMDGRHFERPVNYAL
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEEEEECCCCCCCHHCCCCCEEE
VEIIPPEGIQIDPAKRPYVIVDPRAGHGAGISGFKDASQVGLALRAGHPVYVIIFFPVPE
EEEECCCCCEECCCCCCEEEECCCCCCCCCCCCCCCHHHHCEEEECCCCEEEEEEEECCC
PNQTLVDVTAAHEKFLTEVALRHPQSPKPCLIGNCQGGWAILTLMAANPDVAGVAVVNGA
CCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEECCCCCCEEEEECCC
PLSYWGGENGKNPMRYIGGIWGGSWIAQMAGDLGNGKFDGANLVMNFEMANPKVTYWSKY
CEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCEEHHHHH
YNLFANLDKEEIRFLNFERWWGGFSLLNVNEMRGIIDNLFIGNKLVHGKIPLGQSGNNLD
HHHHHCCCHHHHHEECHHHHCCCEEEEEHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCE
LRNISVPVIIFCSEGDNITPPQQALNWVSDLYSNTLEIKLDGQVIVYLIHKSVGHLGIFV
EEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCEEEEEEEHHCCCCEEEEE
SSEVAKKEHNQIIDLLNYIEHLAPGLYELKLNETKENPKSPPHYLAYIEERSINDIRKGQ
CHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCEEEEEHHCCHHHHHCCC
ESNVAIFNLVRMVSEYNAMSYDLFMAPIIRNISNEYTAELIRKLHPLRQNQYLLSDLNPL
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHCCHH
VHPVSWISPFIRQNRIKISENNPFLTQQLNFSKLINALWDFFSASRDNTVELMFYAVYGY
HHHHHHHHHHHHCCCEEEECCCCCEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
IQLLAPFDPRRDMIVHSPEKDNQEKITQSIIAHISDGGVPEAILRILLLLVKIQGYIIGA
HHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEC
NLPDVIQKLRECNALKHLDKNGFKQIVHSQTIMIEHDPELAFNTIPHLLKSQEERSMVIQ
CCHHHHHHHHHHHHHHHHCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHH
FIEDILKSLKVSPSEEYKKKFQRIKELLQNQV
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10094701 [H]