Click here to switch to the map view.

The map label for this gene is 52842341

Identifier: 52842341

GI number: 52842341

Start: 2373011

End: 2373499

Strand: Direct

Name: 52842341

Synonym: lpg2127

Alternate gene names: NA

Gene position: 2373011-2373499 (Clockwise)

Preceding gene: 52842338

Following gene: 52842344

Centisome position: 69.84

GC content: 36.61

Gene sequence:

>489_bases
ATGAAAATAAGAGCAATTTTTTTCATGATCGCTATTTTTTTTCCAGTTACTTTATTCGCTAGTAATACGACTTGTCCTTT
ATCAAATGGAATCAATGTACTCACTAAAAAGCGAATTTTAAATATTTGTAAAAACGGCACCGTCGTTAAAACCTTTAAAG
TAGCGCTCGGGTACAAAGGCGTTGGTAAAAAAAAGGCTGGGGATAACAAAACTCCAATTGGTTTATATGGGTTAGCCCAT
CCAAGAAAATCCAATCAATTTAAAGTCTTTATTCCAATTCTCTATCCGACTAAAAAGCAATTAGCTGCTGGATATTCAGG
TAGGGATGTTGGGATCCATGGACCAGCCCAGACATCCAATTTATTTGGTTGGTTAAACAACTTACCAGGCTCAACTCGTG
GATGTGTTGCTGTTGGCAAAAACAACTACATCGAGTATGTGGCAAATTGGGTAAAAGCCAATCCTGGAGCTAAGGTTTTA
ATTATTTAA

Upstream 100 bases:

>100_bases
GCTACGTATATTTACATAAGATTTAGCCTGCCAGGTCTATGAATAAAAACAATATTGTGGGATAATTATTGCCCAACTTC
AACAATATTAGCCTATTTAT

Downstream 100 bases:

>100_bases
ATTGAGACGAAATTTGATACCGCCTATTTATTTTATGTAGAATGCCCTGATAGTGGTCGTCTTGATGATAAAGAAAATTC
ATTTAAACCAGGTAAGTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKIRAIFFMIAIFFPVTLFASNTTCPLSNGINVLTKKRILNICKNGTVVKTFKVALGYKGVGKKKAGDNKTPIGLYGLAH
PRKSNQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNNYIEYVANWVKANPGAKVL
II

Sequences:

>Translated_162_residues
MKIRAIFFMIAIFFPVTLFASNTTCPLSNGINVLTKKRILNICKNGTVVKTFKVALGYKGVGKKKAGDNKTPIGLYGLAH
PRKSNQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNNYIEYVANWVKANPGAKVL
II
>Mature_162_residues
MKIRAIFFMIAIFFPVTLFASNTTCPLSNGINVLTKKRILNICKNGTVVKTFKVALGYKGVGKKKAGDNKTPIGLYGLAH
PRKSNQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSNLFGWLNNLPGSTRGCVAVGKNNYIEYVANWVKANPGAKVL
II

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17615; Mature: 17615

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRAIFFMIAIFFPVTLFASNTTCPLSNGINVLTKKRILNICKNGTVVKTFKVALGYKG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC
VGKKKAGDNKTPIGLYGLAHPRKSNQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSN
CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHH
LFGWLNNLPGSTRGCVAVGKNNYIEYVANWVKANPGAKVLII
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure
MKIRAIFFMIAIFFPVTLFASNTTCPLSNGINVLTKKRILNICKNGTVVKTFKVALGYKG
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCC
VGKKKAGDNKTPIGLYGLAHPRKSNQFKVFIPILYPTKKQLAAGYSGRDVGIHGPAQTSN
CCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEECCCHHHHHCCCCCCCCCCCCCCCCHH
LFGWLNNLPGSTRGCVAVGKNNYIEYVANWVKANPGAKVLII
HHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA