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The map label for this gene is 52842319

Identifier: 52842319

GI number: 52842319

Start: 2352473

End: 2352970

Strand: Reverse

Name: 52842319

Synonym: lpg2105

Alternate gene names: NA

Gene position: 2352970-2352473 (Counterclockwise)

Preceding gene: 52842320

Following gene: 52842317

Centisome position: 69.25

GC content: 38.55

Gene sequence:

>498_bases
ATGCTCAATAATTCGGTAGAAACTTCTATAAATAAGCCGTTCATTTCTAAAATTATTCAAATTTATCTATCAGTTACAAA
GGTTTTGGAGAAAATTGCCCTTCCTGTGCTTGTTTTATTCATGCGCTTATGGATGGCTAAAATCTTCTGGTATTCTGGCA
TGACTAAAATATCAAACTGGCAGTCGACCGTCTTCTTGTTTAGGGAAGAATATAAAGTTCCTTTTGTGCCTCCAGAAATT
ACTGCTTGTCTTGCAACCTCTTTTGAGCTCGCTTGCCCTGTACTTCTTATCTTTGGGTTTGCAACAAGACTTGCAACATT
GCCTTTACTGGCTATGACCGCTGTCATTCAGTTTACCTATCTCGATTTAATAGACCATCGTTACTGGGCTATGCTGCTTG
CTTTGATTTTATTTTATGGCCCGGGTTCACTATCTCTTGACCACTTAATTTCTAAGAAATTTGGATTATTGGCATCTTCG
CGTGGCGATGTTGCCTAA

Upstream 100 bases:

>100_bases
TATGCACAAACAATCAATCAAAATTTTGACTTAACTTCAGCAGTTGCTTTTGTGTTACAGGAGCAGCTGGTCGACAATAT
CATTAAAACCGGAGGCAATA

Downstream 100 bases:

>100_bases
ATCAAATTTGGTGTGCATAATGCTTCTGAGTATAATAAGTCCAGCGATCTCAATAATTCTTTTTCTAATAGATTGCCCGC
TCAGAAAAAGTAAATACTTT

Product: transmembrane protein

Products: NA

Alternate protein names: Transmembrane Protein; DoxD Family Protein; NADH Dehydrogenase; Integral Membrane Protein; DoxD Domain-Containing Protein; ThiosulphateQuinone Oxidoreductase

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MLNNSVETSINKPFISKIIQIYLSVTKVLEKIALPVLVLFMRLWMAKIFWYSGMTKISNWQSTVFLFREEYKVPFVPPEI
TACLATSFELACPVLLIFGFATRLATLPLLAMTAVIQFTYLDLIDHRYWAMLLALILFYGPGSLSLDHLISKKFGLLASS
RGDVA

Sequences:

>Translated_165_residues
MLNNSVETSINKPFISKIIQIYLSVTKVLEKIALPVLVLFMRLWMAKIFWYSGMTKISNWQSTVFLFREEYKVPFVPPEI
TACLATSFELACPVLLIFGFATRLATLPLLAMTAVIQFTYLDLIDHRYWAMLLALILFYGPGSLSLDHLISKKFGLLASS
RGDVA
>Mature_165_residues
MLNNSVETSINKPFISKIIQIYLSVTKVLEKIALPVLVLFMRLWMAKIFWYSGMTKISNWQSTVFLFREEYKVPFVPPEI
TACLATSFELACPVLLIFGFATRLATLPLLAMTAVIQFTYLDLIDHRYWAMLLALILFYGPGSLSLDHLISKKFGLLASS
RGDVA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18703; Mature: 18703

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNNSVETSINKPFISKIIQIYLSVTKVLEKIALPVLVLFMRLWMAKIFWYSGMTKISNW
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCH
QSTVFLFREEYKVPFVPPEITACLATSFELACPVLLIFGFATRLATLPLLAMTAVIQFTY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLIDHRYWAMLLALILFYGPGSLSLDHLISKKFGLLASSRGDVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLNNSVETSINKPFISKIIQIYLSVTKVLEKIALPVLVLFMRLWMAKIFWYSGMTKISNW
CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCH
QSTVFLFREEYKVPFVPPEITACLATSFELACPVLLIFGFATRLATLPLLAMTAVIQFTY
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LDLIDHRYWAMLLALILFYGPGSLSLDHLISKKFGLLASSRGDVA
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA