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The map label for this gene is traK [C]

Identifier: 52842304

GI number: 52842304

Start: 2341530

End: 2342243

Strand: Reverse

Name: traK [C]

Synonym: lpg2090

Alternate gene names: 52842304

Gene position: 2342243-2341530 (Counterclockwise)

Preceding gene: 52842305

Following gene: 52842303

Centisome position: 68.94

GC content: 38.94

Gene sequence:

>714_bases
ATGAAACAAATGGCAATGATATTCAGCTTAGGCTTATTAATAGCAACAGCAGAAGGTGCTCAAATAAAAACAGTCAGAAA
TTATGAAGATATTTTCATTAATGCCTCAATTAAAGAACCCAATAATCTTATGTTAGAGGATGATCGCATTCAGCAAATAA
AAGCACCTGGCAACACCCTGGTTGATGCATGCAATGGGAAGGCGAATTGCAAATTAATTGATGATACGACGGGTATTCTT
ACTTTTTTGCCATCGCCTCTATACCACACACGAGCTTTTACTATCAATTTGCTGACTGAAAAAGGTCTTTTTTACAACGT
GCGTGTAGAACCAAAGCCCATTGCGTCACAAACAATCGTTTTTAAATCCTACAGAAATCCTGTAATTCGTGCCCGCGCTC
CACATACATCAAGTTATGAAAAGGTGATGGTTGGTTTTTTACGAGCGCTTGTTAATGGGTATTTGCCAGAAGGTTTTACC
CAAACAATACCCAAAAATCCTTCAGTCTATAAAGCACAAAAAACACAACTAAAACGCTTATTGACAGTTAATGGCAATCG
TATGCGGGGTGAAATTTTTGAGTTAAAAAACGTAACCAACCAGCCTATTGATGCCAAGGAATCCTGGTTTAATTGGCCTG
GAACCAAAGGGGTGGCGCTTGCTAAAACCCATTTAGCGCCGTTTGAAACTACTCGATTGTACAGGATTAGCTAA

Upstream 100 bases:

>100_bases
TTGGCGCGGATTTGATGTCTGATGTACGGGAGACTTTTTTGATTAGGTATTCCTATGAGTATGGCCTGTTGAAACTAACG
AATCTTGAGAAGGTGTAATC

Downstream 100 bases:

>100_bases
CATGTCTATTCAACTTAAAAAACAACAACAGATCTTTTTAGGGATTGTTATCGGCGTTATAGTGTTGGTGATTGCGTGCT
TTGCCTTATTGGGAAACAAG

Product: putative conjugative transfer protein TraK

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKQMAMIFSLGLLIATAEGAQIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDACNGKANCKLIDDTTGIL
TFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKSYRNPVIRARAPHTSSYEKVMVGFLRALVNGYLPEGFT
QTIPKNPSVYKAQKTQLKRLLTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKTHLAPFETTRLYRIS

Sequences:

>Translated_237_residues
MKQMAMIFSLGLLIATAEGAQIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDACNGKANCKLIDDTTGIL
TFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKSYRNPVIRARAPHTSSYEKVMVGFLRALVNGYLPEGFT
QTIPKNPSVYKAQKTQLKRLLTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKTHLAPFETTRLYRIS
>Mature_237_residues
MKQMAMIFSLGLLIATAEGAQIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTLVDACNGKANCKLIDDTTGIL
TFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIVFKSYRNPVIRARAPHTSSYEKVMVGFLRALVNGYLPEGFT
QTIPKNPSVYKAQKTQLKRLLTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKTHLAPFETTRLYRIS

Specific function: Involved In Pilus Assembly. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26707; Mature: 26707

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQMAMIFSLGLLIATAEGAQIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTL
CCHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEEEECCCCCEEEECCHHHEECCCCCCE
VDACNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIV
EECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEE
FKSYRNPVIRARAPHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRL
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEHHHHHHHHHH
LTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKTHLAPFETTRLYRIS
EEECCCEECCHHEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MKQMAMIFSLGLLIATAEGAQIKTVRNYEDIFINASIKEPNNLMLEDDRIQQIKAPGNTL
CCHHHHHHHHHHHEEECCCCEEEEECCCEEEEEEEEECCCCCEEEECCHHHEECCCCCCE
VDACNGKANCKLIDDTTGILTFLPSPLYHTRAFTINLLTEKGLFYNVRVEPKPIASQTIV
EECCCCCCCEEEEECCCCEEEECCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCEEEE
FKSYRNPVIRARAPHTSSYEKVMVGFLRALVNGYLPEGFTQTIPKNPSVYKAQKTQLKRL
EECCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEHHHHHHHHHH
LTVNGNRMRGEIFELKNVTNQPIDAKESWFNWPGTKGVALAKTHLAPFETTRLYRIS
EEECCCEECCHHEEECCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA