Click here to switch to the map view.

The map label for this gene is 52842266

Identifier: 52842266

GI number: 52842266

Start: 2291585

End: 2291884

Strand: Direct

Name: 52842266

Synonym: lpg2049

Alternate gene names: NA

Gene position: 2291585-2291884 (Clockwise)

Preceding gene: 52842265

Following gene: 52842268

Centisome position: 67.44

GC content: 39.33

Gene sequence:

>300_bases
ATGGGACGTTTTATCTTTAAAGGGACCTCTTTAATAAAACTGATGCTAGCTTTTACCCTTCTGATTGGAGCTTTGATTTT
AGTAACGCCTGCAAATGCCAAAGCAGTTAACAGAGATATCAATCCGATAATTAATAAATCCAATCCGACTCAAATGGCTT
ACTGGGTACGCTATAGATATTGGGGCCCATATTACTATCGCGGATACTACTATAGACCGTATTACTATCGCTGGGGTTAT
CCATATTACAGACCTTACTACAGGCCCTACTACAGACCTTATTACTATTATCGCTGGTAG

Upstream 100 bases:

>100_bases
TAAAATTTAAACTCATGCCCAGTAATGATTGTGTACAAAATTTAATCAAATAATCCCGTGTAGTCTATACTTAAATAAAA
TACGCTTTAAGGAGTAAAAA

Downstream 100 bases:

>100_bases
GCGATAAGACGCTGCTGGCCTATGTATAGAATATAGCTATGGTGATATAGCCTAAGAAGGCTTTGCCAAGAAGAGGATAT
TATACTTATAACACAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MGRFIFKGTSLIKLMLAFTLLIGALILVTPANAKAVNRDINPIINKSNPTQMAYWVRYRYWGPYYYRGYYYRPYYYRWGY
PYYRPYYRPYYRPYYYYRW

Sequences:

>Translated_99_residues
MGRFIFKGTSLIKLMLAFTLLIGALILVTPANAKAVNRDINPIINKSNPTQMAYWVRYRYWGPYYYRGYYYRPYYYRWGY
PYYRPYYRPYYRPYYYYRW
>Mature_98_residues
GRFIFKGTSLIKLMLAFTLLIGALILVTPANAKAVNRDINPIINKSNPTQMAYWVRYRYWGPYYYRGYYYRPYYYRWGYP
YYRPYYRPYYRPYYYYRW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12499; Mature: 12367

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFIFKGTSLIKLMLAFTLLIGALILVTPANAKAVNRDINPIINKSNPTQMAYWVRYRY
CCCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEECCCCCCEEEEEEEEEE
WGPYYYRGYYYRPYYYRWGYPYYRPYYRPYYRPYYYYRW
CCCEEECCEEECCEEEECCCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure 
GRFIFKGTSLIKLMLAFTLLIGALILVTPANAKAVNRDINPIINKSNPTQMAYWVRYRY
CCEEECCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEECCCCCCEEEEEEEEEE
WGPYYYRGYYYRPYYYRWGYPYYRPYYRPYYRPYYYYRW
CCCEEECCEEECCEEEECCCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA