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The map label for this gene is yrbE [C]

Identifier: 52842264

GI number: 52842264

Start: 2289389

End: 2290513

Strand: Reverse

Name: yrbE [C]

Synonym: lpg2047

Alternate gene names: 52842264

Gene position: 2290513-2289389 (Counterclockwise)

Preceding gene: 52842267

Following gene: 52842263

Centisome position: 67.41

GC content: 37.6

Gene sequence:

>1125_bases
ATGGAACAGACTAGCGCACAGATTGTTTTCGAACAAAAGAATGCAACATACCAGTGTTGTGGTTCCTGGTCTGTTTTAAC
CCTTGATGGATTACCTAAAAAATTTAGTACAAGCCCATTACCTGATTCACAACAAATAACCATAAACGGTGAAAAAATCA
GTGCTTTTGATAGTGCTGGAGCTCTGGCATTAAAGAAATGCATAGATGAGCTTAAAAAAAGAAATAACCAGATTGAATTA
GTCAATTTTTCTGATAGCCAACAGCAAATGCTGGAGCTCATAGAGTCCAAACAAGATATTCTTTCCTATCAATTACCTGC
TGTTTCCAAAGAAGGTGTTCTTTATCAGATTGGTAAAGAGTCAGAAAATAAATTGCATCAGGTTGATGGTTTGATTATTT
TGATAGGAGATTTAAGCACAAGGCTTTTCGAAGCGTTTGCATATTGGCGGCGATTTCATTTGCCCAGCATTGTTTCTGTT
ATAGATTCTGCCGGGCTAAAAGCGTTACCCATCATTGGCTTATTGTCTTTTTTGATAGGGGTCGTTTTAGCTTATCAAAT
GGGTTTGCAATTAGAAACTTATGGTGCCAATATTTTTATTGCCTATTTATCTGGCATGGCAATTTTTCGGGAATTTGGAC
CTTTAATTACAGCAATCATTGTAGCGGGGCGCACCAGCTCATCATTCACAGCTCAAATTGGCAGCATGAAGATTAATGAA
GAGGTAGATGCCATCTTGACCATGGGGCTTTCTCCCACTGAATTATTAGTTTTACCCAAAGTCTTGGGTTTATTAATAGT
GTTTCCTTTATTAATTTTTTGGGCAGATGTCTTTAGCATTTGGGGGGCAATGATCATGTCCAAAAATATGTTAAACATCG
GTTTTGAAGATTTTTTAAGCCGCTTAAGAGATTCCGTAGGACTTAACCAAATGATGCTGGGTTTGTATAAAGCTCCTGCC
TTCTCAATATTAATTGCTTTAGTGGGGTGTTTTCAGGGGTTTAGAGTAGAATCAAGTGCTGATAGTATAGGAAGCCAAAC
AACCAAAAGTGTTGTGCAAGCTTTATTCTTAATTATTATTGCTGACGCTGCTTTCTCCATAGCGTATAGCTGGATGGGTT
TATAA

Upstream 100 bases:

>100_bases
AGAGCACTATCTATATTATTATGATACCATGAATCGTAAGTTTTTGCGGTCTTGTGGTATTTTGTATTATTCTAGGAAAA
TTCAATAAAAAGAAATAAAT

Downstream 100 bases:

>100_bases
ATGAGTGAACCAGTCATTGAAATCAAGGGAATGAAAAATTGTCTTGGCGGTCAATGGGTGCACACCGATGTTAATCTCAC
CGTAGAAAGGGGAGAAATCC

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLDGLPKKFSTSPLPDSQQITINGEKISAFDSAGALALKKCIDELKKRNNQIEL
VNFSDSQQQMLELIESKQDILSYQLPAVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLSRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL

Sequences:

>Translated_374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLDGLPKKFSTSPLPDSQQITINGEKISAFDSAGALALKKCIDELKKRNNQIEL
VNFSDSQQQMLELIESKQDILSYQLPAVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLSRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL
>Mature_374_residues
MEQTSAQIVFEQKNATYQCCGSWSVLTLDGLPKKFSTSPLPDSQQITINGEKISAFDSAGALALKKCIDELKKRNNQIEL
VNFSDSQQQMLELIESKQDILSYQLPAVSKEGVLYQIGKESENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSV
IDSAGLKALPIIGLLSFLIGVVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLSRLRDSVGLNQMMLGLYKAPA
FSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIIIADAAFSIAYSWMGL

Specific function: Could be part of an ABC transporter complex [H]

COG id: COG0767

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaE permease family [H]

Homologues:

Organism=Escherichia coli, GI1789585, Length=205, Percent_Identity=28.2926829268293, Blast_Score=89, Evalue=6e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003453 [H]

Pfam domain/function: PF02405 DUF140 [H]

EC number: NA

Molecular weight: Translated: 41045; Mature: 41045

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTSAQIVFEQKNATYQCCGSWSVLTLDGLPKKFSTSPLPDSQQITINGEKISAFDSAG
CCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEECHHCCC
ALALKKCIDELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSKEGVLYQIGKE
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
SENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSFLIG
CHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECH
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHH
RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII
HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCHHHHCHHHHHHHHHHHHHHHH
ADAAFSIAYSWMGL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MEQTSAQIVFEQKNATYQCCGSWSVLTLDGLPKKFSTSPLPDSQQITINGEKISAFDSAG
CCCCCCEEEEECCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCEEEEECCEEECHHCCC
ALALKKCIDELKKRNNQIELVNFSDSQQQMLELIESKQDILSYQLPAVSKEGVLYQIGKE
HHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCC
SENKLHQVDGLIILIGDLSTRLFEAFAYWRRFHLPSIVSVIDSAGLKALPIIGLLSFLIG
CHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHH
VVLAYQMGLQLETYGANIFIAYLSGMAIFREFGPLITAIIVAGRTSSSFTAQIGSMKINE
HHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEECH
EVDAILTMGLSPTELLVLPKVLGLLIVFPLLIFWADVFSIWGAMIMSKNMLNIGFEDFLS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHH
RLRDSVGLNQMMLGLYKAPAFSILIALVGCFQGFRVESSADSIGSQTTKSVVQALFLIII
HHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCHHHHCHHHHHHHHHHHHHHHH
ADAAFSIAYSWMGL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA