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The map label for this gene is yhhT [H]

Identifier: 52842249

GI number: 52842249

Start: 2274807

End: 2275943

Strand: Reverse

Name: yhhT [H]

Synonym: lpg2032

Alternate gene names: 52842249

Gene position: 2275943-2274807 (Counterclockwise)

Preceding gene: 52842256

Following gene: 52842248

Centisome position: 66.98

GC content: 37.55

Gene sequence:

>1137_bases
CTGGCAATTTTGCCCAAATCATTACTAAGTTACTTGTTGCTTGCGAGTATCTATTCATCAAAGATGGAGTGTAATTGGAT
GAATCGTATTATAACGTTCACAGCGGGTTTGATACTGGTTTGGATAACAGGTTATTTATTAATCGCAGGAAGAGGACTAT
TAATTCCAATTGTTATATCCATTTTTGTCTGGCACCTGTTGAATACCATTAATAGCGGTGTTCAGAAAATTCCTTTCATT
GGCACACATCTCCCATCCTGGATAAGGATGATTTTATCTTTGTTTGTTGTTGTTTGCCTCGTAATGGTTCTTATTAACAT
CATTACCAATAATGTCAGTGATGTGATAGCCGCTTCTCCCAGGTATCAGGAAAATTTACTGCACATATTTAACAGCCTGG
ATCAACGATTTCATGTTAAGGGTATTTTTGATTTCGACAGTTTAATTCAAGGGTTAAGCATTCAGAGTATGCTTGTTAAT
ATTTATGGGGTTTTTACGACAATAACCAGTTCCGCTGTACTGATTTCCTTATATGTTGTGTTTCTGTTTGTCGAGCAGCA
TTATTTTACTCAAAAGATGGATGCCTTTTTCCCTCAGGCAGAGCACAGGAAGCTGGTTAAAAACATTATCTCCCATATTA
CAAAAGATACTCAAACTTATCTGGGTATTAAAACTTTGTTGAGCCTGCTCACTGCCACGTTGAGTTGGTTTATTATGAAA
TGGGTTGGATTGGATTTTGCCGAGTTTTGGGCATTATTAATTTTCTTTTTAAATTATATCCCCAATATAGGAGCTATTGT
AGCAACAGCTTTTCCAGCTGCGCTTGCTTTGATCCAATTTGAAAGCTGGTGGCCGTTTTTGGAAGTGACTTCCGGGATAG
TGGCTATACAGTTTTTCGTGGGGAATTTTCTAGAGCCTCGTCTATTAGGTAAATCACTAAACTTAAGTCCTTTAGTGATA
TTGTTTGCCTTAGCGCTATGGGGTGCCATTTGGGGGGTACTAGGCATGTTTTTGTCTGTGCCTATCACTGTAATGATGAT
GATTATTTTTGCGCACTTTGATGTGACAAGACCCATAGCAATTCTGCTGTCTCAAGATGGATATATTCACAAATCCTATG
AATCTCTTGAAAATTAA

Upstream 100 bases:

>100_bases
CCAGTTAAATATTCACAAGAGTTACTCAGCACGGTATTATTTAAGATTAAAAATTTAATAATAACAGGAAAATATATTCG
TTGCGACTTGAGTCATCATT

Downstream 100 bases:

>100_bases
TGAGCTATTGCTGTTTCTATTGTTGTAATGATGGTGCTGCGGGGTTGAGAGCCTTTCCATATGGTATGAAAAAGAGCATA
ATATCGGTATTTTTGACGGA

Product: transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 377

Protein sequence:

>378_residues
MAILPKSLLSYLLLASIYSSKMECNWMNRIITFTAGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFI
GTHLPSWIRMILSLFVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGLSIQSMLVN
IYGVFTTITSSAVLISLYVVFLFVEQHYFTQKMDAFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMK
WVGLDFAEFWALLIFFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLNLSPLVI
LFALALWGAIWGVLGMFLSVPITVMMMIIFAHFDVTRPIAILLSQDGYIHKSYESLEN

Sequences:

>Translated_378_residues
MAILPKSLLSYLLLASIYSSKMECNWMNRIITFTAGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFI
GTHLPSWIRMILSLFVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGLSIQSMLVN
IYGVFTTITSSAVLISLYVVFLFVEQHYFTQKMDAFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMK
WVGLDFAEFWALLIFFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLNLSPLVI
LFALALWGAIWGVLGMFLSVPITVMMMIIFAHFDVTRPIAILLSQDGYIHKSYESLEN
>Mature_377_residues
AILPKSLLSYLLLASIYSSKMECNWMNRIITFTAGLILVWITGYLLIAGRGLLIPIVISIFVWHLLNTINSGVQKIPFIG
THLPSWIRMILSLFVVVCLVMVLINIITNNVSDVIAASPRYQENLLHIFNSLDQRFHVKGIFDFDSLIQGLSIQSMLVNI
YGVFTTITSSAVLISLYVVFLFVEQHYFTQKMDAFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMKW
VGLDFAEFWALLIFFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFVGNFLEPRLLGKSLNLSPLVIL
FALALWGAIWGVLGMFLSVPITVMMMIIFAHFDVTRPIAILLSQDGYIHKSYESLEN

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI87082271, Length=264, Percent_Identity=28.4090909090909, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1787885, Length=156, Percent_Identity=38.4615384615385, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI1788838, Length=313, Percent_Identity=24.9201277955272, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42753; Mature: 42622

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAILPKSLLSYLLLASIYSSKMECNWMNRIITFTAGLILVWITGYLLIAGRGLLIPIVIS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IFVWHLLNTINSGVQKIPFIGTHLPSWIRMILSLFVVVCLVMVLINIITNNVSDVIAASP
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
RYQENLLHIFNSLDQRFHVKGIFDFDSLIQGLSIQSMLVNIYGVFTTITSSAVLISLYVV
CHHHHHHHHHHHHHHHEECCEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFVEQHYFTQKMDAFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGLDFAEFWALLIFFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFV
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GNFLEPRLLGKSLNLSPLVILFALALWGAIWGVLGMFLSVPITVMMMIIFAHFDVTRPIA
HCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILLSQDGYIHKSYESLEN
HHCCCCCCEEHHHHHHCC
>Mature Secondary Structure 
AILPKSLLSYLLLASIYSSKMECNWMNRIITFTAGLILVWITGYLLIAGRGLLIPIVIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
IFVWHLLNTINSGVQKIPFIGTHLPSWIRMILSLFVVVCLVMVLINIITNNVSDVIAASP
HHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC
RYQENLLHIFNSLDQRFHVKGIFDFDSLIQGLSIQSMLVNIYGVFTTITSSAVLISLYVV
CHHHHHHHHHHHHHHHEECCEEECHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLFVEQHYFTQKMDAFFPQAEHRKLVKNIISHITKDTQTYLGIKTLLSLLTATLSWFIMK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WVGLDFAEFWALLIFFLNYIPNIGAIVATAFPAALALIQFESWWPFLEVTSGIVAIQFFV
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GNFLEPRLLGKSLNLSPLVILFALALWGAIWGVLGMFLSVPITVMMMIIFAHFDVTRPIA
HCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
ILLSQDGYIHKSYESLEN
HHCCCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]