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The map label for this gene is 52842184

Identifier: 52842184

GI number: 52842184

Start: 2206539

End: 2207105

Strand: Direct

Name: 52842184

Synonym: lpg1967

Alternate gene names: NA

Gene position: 2206539-2207105 (Clockwise)

Preceding gene: 52842181

Following gene: 52842185

Centisome position: 64.94

GC content: 35.27

Gene sequence:

>567_bases
ATGCCTATGAATATAAGTAATACGAAAGAACGGATATTAGCAGTTGCGGAAGCATTGATCCAAAAAGACGGATATAACGC
CTTTAGTTTCAAAGATATTGCAACAGCCATCAATATTAAAACTGCCAGCATCCATTATCATTTTCCTTCAAAAGAAGATC
TTGGTGTTGCCGTTATATCCTGGCATACCGATAAAATTGCTGCTGTGCTATCTGACATAAGCAATAATTCGTCGTTATCA
GCCAAGGAAAAAATTCAAAAATTCTTTGATGCCATTTTAACACTCACCTACAACTCTGAAAACAAAATGTGCCTCGGCGG
TATGTTCGCCTCTGATTTTCAATCATTACCCGTTTCAATTCAAAATCAGGCAAAAAAATTTTTTGAGCTTATCATCGAAT
GGCTTAAAGGAGTTCTTGAAACAAATGGATATGATAACGAATCCTCATTATCTCTTGCAAAACAAATTATTTCATTGGTT
GAAGGCGGATTATTATTAGCAAGATTATATGGAGATGAAACGTTCCTGGAAGGAGTTCGGCATTTTATTGATCAAACAAT
AAAGTGA

Upstream 100 bases:

>100_bases
AGTCCACCACCTACTTCTATTTAGATAAACAAGTGTTATTTTAATTTGATATAGAAAACTATAAAAAGCTTGACAATCTA
TCTATGAATAGGTAGAATTT

Downstream 100 bases:

>100_bases
TTTTTTTTAACACCACAAACTATCTATCAGTAGGTAGATTTTATGGGGAAATTTTATATGAGTAAAGTCAAGGCAAAAAT
TATAGCTTTTTCAACAGTAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Regulatory Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator Protein; TetR/AcrR Family Transcriptional Regulator; HTH-Type Protein SlmA; AcrR Family Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Regulatory Protein Tetr; Transcriptional Regulator Of TetR Family Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein Tetr Family

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLS
AKEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLV
EGGLLLARLYGDETFLEGVRHFIDQTIK

Sequences:

>Translated_188_residues
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLS
AKEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLV
EGGLLLARLYGDETFLEGVRHFIDQTIK
>Mature_187_residues
PMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVISWHTDKIAAVLSDISNNSSLSA
KEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLPVSIQNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVE
GGLLLARLYGDETFLEGVRHFIDQTIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20928; Mature: 20797

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVIS
CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCEEEEE
WHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLPVSI
ECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCEEECCHHHHHHHHCCCHH
QNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVEGGLLLARLYGDETFLEGVR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHH
HFIDQTIK
HHHHHCCC
>Mature Secondary Structure 
PMNISNTKERILAVAEALIQKDGYNAFSFKDIATAINIKTASIHYHFPSKEDLGVAVIS
CCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEEEEECCCCCCCCEEEEE
WHTDKIAAVLSDISNNSSLSAKEKIQKFFDAILTLTYNSENKMCLGGMFASDFQSLPVSI
ECHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHEEEECCCCCEEECCHHHHHHHHCCCHH
QNQAKKFFELIIEWLKGVLETNGYDNESSLSLAKQIISLVEGGLLLARLYGDETFLEGVR
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHHHH
HFIDQTIK
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA